Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Foxn1Q61575 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Foxn1Q61575 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Foxn1Q61575 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Foxn1Q61575 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Foxn1Q61575 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Foxn1Q61575 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.45■□□□□ 0.06
Foxn1Q61575 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Foxn1Q61575 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Foxn1Q61575 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Foxn1Q61575 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Foxn1Q61575 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Foxn1Q61575 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Foxn1Q61575 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Foxn1Q61575 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Foxn1Q61575 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Foxn1Q61575 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Foxn1Q61575 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.45■□□□□ 0.06
Foxn1Q61575 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Foxn1Q61575 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC15.45■□□□□ 0.06
Foxn1Q61575 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Foxn1Q61575 Gm15276-201ENSMUST00000145953 498 ntBASIC15.45■□□□□ 0.06
Foxn1Q61575 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Foxn1Q61575 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Foxn1Q61575 Gm45118-201ENSMUST00000208928 825 ntBASIC15.45■□□□□ 0.06
Foxn1Q61575 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC15.45■□□□□ 0.06
Foxn1Q61575 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Foxn1Q61575 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Foxn1Q61575 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
Foxn1Q61575 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Foxn1Q61575 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Foxn1Q61575 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Foxn1Q61575 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Foxn1Q61575 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Foxn1Q61575 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Foxn1Q61575 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxn1Q61575 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Foxn1Q61575 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxn1Q61575 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxn1Q61575 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxn1Q61575 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxn1Q61575 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Foxn1Q61575 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxn1Q61575 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Foxn1Q61575 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Foxn1Q61575 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.44■□□□□ 0.06
Foxn1Q61575 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Foxn1Q61575 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxn1Q61575 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxn1Q61575 Gm10434-201ENSMUST00000101158 471 ntBASIC15.44■□□□□ 0.06
Foxn1Q61575 Gm14350-201ENSMUST00000116642 640 ntBASIC15.44■□□□□ 0.06
Foxn1Q61575 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC15.44■□□□□ 0.06
Foxn1Q61575 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxn1Q61575 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC15.44■□□□□ 0.06
Foxn1Q61575 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Foxn1Q61575 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.44■□□□□ 0.06
Foxn1Q61575 Gm26956-201ENSMUST00000182176 986 ntBASIC15.44■□□□□ 0.06
Foxn1Q61575 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Foxn1Q61575 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Foxn1Q61575 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC15.44■□□□□ 0.06
Foxn1Q61575 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC15.44■□□□□ 0.06
Foxn1Q61575 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Foxn1Q61575 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxn1Q61575 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxn1Q61575 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxn1Q61575 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxn1Q61575 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Foxn1Q61575 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.44■□□□□ 0.06
Foxn1Q61575 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Foxn1Q61575 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Foxn1Q61575 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxn1Q61575 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Foxn1Q61575 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Foxn1Q61575 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxn1Q61575 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxn1Q61575 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxn1Q61575 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Foxn1Q61575 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Foxn1Q61575 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Foxn1Q61575 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Foxn1Q61575 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Foxn1Q61575 Gm13813-201ENSMUST00000120998 787 ntBASIC15.43■□□□□ 0.06
Foxn1Q61575 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC15.43■□□□□ 0.06
Foxn1Q61575 n-R5s14-201ENSMUST00000122688 107 ntBASIC15.43■□□□□ 0.06
Foxn1Q61575 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Foxn1Q61575 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC15.43■□□□□ 0.06
Foxn1Q61575 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC15.43■□□□□ 0.06
Foxn1Q61575 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Foxn1Q61575 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC15.43■□□□□ 0.06
Foxn1Q61575 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC15.43■□□□□ 0.06
Foxn1Q61575 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.43■□□□□ 0.06
Foxn1Q61575 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Foxn1Q61575 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Foxn1Q61575 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Foxn1Q61575 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Foxn1Q61575 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Foxn1Q61575 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Foxn1Q61575 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Foxn1Q61575 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.43■□□□□ 0.06
Foxn1Q61575 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms