Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col12a1Q60847 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col12a1Q60847 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col12a1Q60847 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col12a1Q60847 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col12a1Q60847 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Col12a1Q60847 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col12a1Q60847 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col12a1Q60847 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col12a1Q60847 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col12a1Q60847 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col12a1Q60847 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.1□□□□□ -0.31
Col12a1Q60847 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.1□□□□□ -0.31
Col12a1Q60847 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.1□□□□□ -0.31
Col12a1Q60847 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col12a1Q60847 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col12a1Q60847 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Col12a1Q60847 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.1□□□□□ -0.31
Col12a1Q60847 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col12a1Q60847 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col12a1Q60847 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col12a1Q60847 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col12a1Q60847 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Col12a1Q60847 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col12a1Q60847 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col12a1Q60847 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col12a1Q60847 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.1□□□□□ -0.31
Col12a1Q60847 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.1□□□□□ -0.31
Col12a1Q60847 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Col12a1Q60847 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col12a1Q60847 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.09□□□□□ -0.31
Col12a1Q60847 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.09□□□□□ -0.31
Col12a1Q60847 Gm25880-201ENSMUST00000104331 132 ntBASIC13.09□□□□□ -0.31
Col12a1Q60847 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Col12a1Q60847 Gm6447-201ENSMUST00000118905 835 ntBASIC13.09□□□□□ -0.31
Col12a1Q60847 Gm15547-201ENSMUST00000122152 333 ntBASIC13.09□□□□□ -0.31
Col12a1Q60847 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.09□□□□□ -0.31
Col12a1Q60847 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Col12a1Q60847 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Col12a1Q60847 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col12a1Q60847 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.09□□□□□ -0.31
Col12a1Q60847 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col12a1Q60847 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col12a1Q60847 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col12a1Q60847 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.09□□□□□ -0.31
Col12a1Q60847 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
Col12a1Q60847 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col12a1Q60847 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col12a1Q60847 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.09□□□□□ -0.31
Col12a1Q60847 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Col12a1Q60847 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Col12a1Q60847 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col12a1Q60847 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.09□□□□□ -0.31
Col12a1Q60847 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col12a1Q60847 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col12a1Q60847 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col12a1Q60847 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col12a1Q60847 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col12a1Q60847 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.09□□□□□ -0.31
Col12a1Q60847 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col12a1Q60847 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col12a1Q60847 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC13.09□□□□□ -0.31
Col12a1Q60847 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col12a1Q60847 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col12a1Q60847 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Col12a1Q60847 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC13.08□□□□□ -0.31
Col12a1Q60847 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.08□□□□□ -0.31
Col12a1Q60847 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col12a1Q60847 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col12a1Q60847 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.08□□□□□ -0.31
Col12a1Q60847 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Col12a1Q60847 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col12a1Q60847 Sybu-209ENSMUST00000228639 4113 ntBASIC13.08□□□□□ -0.32
Col12a1Q60847 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col12a1Q60847 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Col12a1Q60847 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col12a1Q60847 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Col12a1Q60847 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
Col12a1Q60847 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.08□□□□□ -0.32
Col12a1Q60847 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.08□□□□□ -0.32
Col12a1Q60847 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col12a1Q60847 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Col12a1Q60847 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col12a1Q60847 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col12a1Q60847 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col12a1Q60847 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col12a1Q60847 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col12a1Q60847 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col12a1Q60847 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col12a1Q60847 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col12a1Q60847 Gm12816-201ENSMUST00000118069 1212 ntBASIC13.08□□□□□ -0.32
Col12a1Q60847 Gm12502-201ENSMUST00000120197 444 ntBASIC13.08□□□□□ -0.32
Col12a1Q60847 Gm14460-201ENSMUST00000121511 639 ntBASIC13.08□□□□□ -0.32
Col12a1Q60847 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col12a1Q60847 Gm5879-201ENSMUST00000089501 1209 ntBASIC13.08□□□□□ -0.32
Col12a1Q60847 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col12a1Q60847 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col12a1Q60847 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col12a1Q60847 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.07□□□□□ -0.32
Col12a1Q60847 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms