Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip3Q60769 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Tnfaip3Q60769 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip3Q60769 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip3Q60769 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip3Q60769 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.79□□□□□ -0.36
Tnfaip3Q60769 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip3Q60769 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip3Q60769 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip3Q60769 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip3Q60769 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip3Q60769 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.79□□□□□ -0.36
Tnfaip3Q60769 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip3Q60769 Gm5161-201ENSMUST00000075243 853 ntBASIC12.79□□□□□ -0.36
Tnfaip3Q60769 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip3Q60769 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.79□□□□□ -0.36
Tnfaip3Q60769 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip3Q60769 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip3Q60769 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip3Q60769 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip3Q60769 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip3Q60769 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Tnfaip3Q60769 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip3Q60769 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Tnfaip3Q60769 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip3Q60769 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Tnfaip3Q60769 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip3Q60769 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Gm15371-201ENSMUST00000117057 784 ntBASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Gm15770-201ENSMUST00000117498 584 ntBASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Gm15806-201ENSMUST00000120696 955 ntBASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Gm9002-201ENSMUST00000178437 499 ntBASIC12.78□□□□□ -0.36
Tnfaip3Q60769 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.78□□□□□ -0.36
Tnfaip3Q60769 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Gm24447-201ENSMUST00000083977 338 ntBASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip3Q60769 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfaip3Q60769 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfaip3Q60769 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Tnfaip3Q60769 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfaip3Q60769 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfaip3Q60769 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfaip3Q60769 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfaip3Q60769 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfaip3Q60769 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfaip3Q60769 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfaip3Q60769 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.77□□□□□ -0.37
Tnfaip3Q60769 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Tnfaip3Q60769 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.77□□□□□ -0.37
Tnfaip3Q60769 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.77□□□□□ -0.37
Tnfaip3Q60769 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfaip3Q60769 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Tnfaip3Q60769 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfaip3Q60769 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfaip3Q60769 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Tnfaip3Q60769 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.77□□□□□ -0.37
Tnfaip3Q60769 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
Tnfaip3Q60769 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfaip3Q60769 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfaip3Q60769 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfaip3Q60769 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfaip3Q60769 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfaip3Q60769 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms