Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Snora78-201ENSMUST00000158630 128 ntBASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Gm8652-201ENSMUST00000181363 964 ntBASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Gm45784-201ENSMUST00000188360 142 ntBASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Gm10012-201ENSMUST00000078252 192 ntBASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.45□□□□□ -0.1
Shroom1Q5SX79 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.44□□□□□ -0.1
Shroom1Q5SX79 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shroom1Q5SX79 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Shroom1Q5SX79 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Shroom1Q5SX79 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shroom1Q5SX79 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Shroom1Q5SX79 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.44□□□□□ -0.1
Shroom1Q5SX79 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Shroom1Q5SX79 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Shroom1Q5SX79 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Shroom1Q5SX79 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Shroom1Q5SX79 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Shroom1Q5SX79 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Shroom1Q5SX79 Gm12742-201ENSMUST00000117326 410 ntBASIC14.44□□□□□ -0.1
Shroom1Q5SX79 Gm13612-201ENSMUST00000119276 390 ntBASIC14.44□□□□□ -0.1
Shroom1Q5SX79 Gm24196-201ENSMUST00000179161 110 ntBASIC14.44□□□□□ -0.1
Shroom1Q5SX79 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shroom1Q5SX79 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shroom1Q5SX79 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shroom1Q5SX79 Gm24447-201ENSMUST00000083977 338 ntBASIC14.44□□□□□ -0.1
Shroom1Q5SX79 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shroom1Q5SX79 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shroom1Q5SX79 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.44□□□□□ -0.1
Shroom1Q5SX79 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shroom1Q5SX79 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shroom1Q5SX79 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shroom1Q5SX79 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.44□□□□□ -0.1
Shroom1Q5SX79 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shroom1Q5SX79 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shroom1Q5SX79 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shroom1Q5SX79 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.43□□□□□ -0.1
Shroom1Q5SX79 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Shroom1Q5SX79 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Shroom1Q5SX79 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shroom1Q5SX79 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Shroom1Q5SX79 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Shroom1Q5SX79 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shroom1Q5SX79 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shroom1Q5SX79 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.43□□□□□ -0.1
Shroom1Q5SX79 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Shroom1Q5SX79 Gm27847-201ENSMUST00000183711 107 ntBASIC14.43□□□□□ -0.1
Shroom1Q5SX79 Gm27375-201ENSMUST00000183799 107 ntBASIC14.43□□□□□ -0.1
Shroom1Q5SX79 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.43□□□□□ -0.1
Shroom1Q5SX79 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shroom1Q5SX79 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Shroom1Q5SX79 Gm5161-201ENSMUST00000075243 853 ntBASIC14.43□□□□□ -0.1
Shroom1Q5SX79 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Shroom1Q5SX79 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shroom1Q5SX79 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
Shroom1Q5SX79 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shroom1Q5SX79 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shroom1Q5SX79 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shroom1Q5SX79 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shroom1Q5SX79 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shroom1Q5SX79 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms