Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vps54Q5SPW0 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vps54Q5SPW0 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vps54Q5SPW0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps54Q5SPW0 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps54Q5SPW0 Mir692-1-201ENSMUST00000102263 109 ntBASIC16.29■□□□□ 0.2
Vps54Q5SPW0 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC16.29■□□□□ 0.2
Vps54Q5SPW0 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps54Q5SPW0 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vps54Q5SPW0 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.29■□□□□ 0.2
Vps54Q5SPW0 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps54Q5SPW0 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps54Q5SPW0 Gm7067-201ENSMUST00000207698 1249 ntBASIC16.29■□□□□ 0.2
Vps54Q5SPW0 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16.29■□□□□ 0.2
Vps54Q5SPW0 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Vps54Q5SPW0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps54Q5SPW0 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps54Q5SPW0 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps54Q5SPW0 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps54Q5SPW0 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.29■□□□□ 0.2
Vps54Q5SPW0 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps54Q5SPW0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps54Q5SPW0 Gm2420-202ENSMUST00000202224 2249 ntBASIC16.29■□□□□ 0.2
Vps54Q5SPW0 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps54Q5SPW0 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps54Q5SPW0 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps54Q5SPW0 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Vps54Q5SPW0 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps54Q5SPW0 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps54Q5SPW0 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps54Q5SPW0 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps54Q5SPW0 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps54Q5SPW0 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps54Q5SPW0 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps54Q5SPW0 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps54Q5SPW0 Gm15371-201ENSMUST00000117057 784 ntBASIC16.28■□□□□ 0.2
Vps54Q5SPW0 Gm6244-201ENSMUST00000178732 841 ntBASIC16.28■□□□□ 0.2
Vps54Q5SPW0 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps54Q5SPW0 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC16.28■□□□□ 0.2
Vps54Q5SPW0 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Vps54Q5SPW0 AC132467.2-202ENSMUST00000227726 559 ntBASIC16.28■□□□□ 0.2
Vps54Q5SPW0 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps54Q5SPW0 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps54Q5SPW0 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps54Q5SPW0 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps54Q5SPW0 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps54Q5SPW0 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps54Q5SPW0 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps54Q5SPW0 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps54Q5SPW0 Gm14752-201ENSMUST00000120719 2075 ntBASIC16.28■□□□□ 0.2
Vps54Q5SPW0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps54Q5SPW0 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps54Q5SPW0 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps54Q5SPW0 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps54Q5SPW0 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Vps54Q5SPW0 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.27■□□□□ 0.2
Vps54Q5SPW0 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Vps54Q5SPW0 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC16.27■□□□□ 0.2
Vps54Q5SPW0 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps54Q5SPW0 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps54Q5SPW0 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps54Q5SPW0 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Vps54Q5SPW0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps54Q5SPW0 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps54Q5SPW0 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vps54Q5SPW0 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps54Q5SPW0 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vps54Q5SPW0 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps54Q5SPW0 Gm9002-201ENSMUST00000178437 499 ntBASIC16.27■□□□□ 0.2
Vps54Q5SPW0 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC16.27■□□□□ 0.2
Vps54Q5SPW0 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vps54Q5SPW0 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC16.27■□□□□ 0.2
Vps54Q5SPW0 AC125117.1-201ENSMUST00000228121 468 ntBASIC16.27■□□□□ 0.2
Vps54Q5SPW0 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps54Q5SPW0 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC16.27■□□□□ 0.2
Vps54Q5SPW0 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps54Q5SPW0 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.27■□□□□ 0.19
Vps54Q5SPW0 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Vps54Q5SPW0 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vps54Q5SPW0 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vps54Q5SPW0 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Vps54Q5SPW0 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vps54Q5SPW0 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Vps54Q5SPW0 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vps54Q5SPW0 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Vps54Q5SPW0 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Vps54Q5SPW0 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Vps54Q5SPW0 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vps54Q5SPW0 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Vps54Q5SPW0 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC16.27■□□□□ 0.19
Vps54Q5SPW0 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vps54Q5SPW0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Matn2-206ENSMUST00000228570 2798 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms