Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC10.57□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm9103-201ENSMUST00000119371 405 ntBASIC10.57□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Mir5131-201ENSMUST00000175426 93 ntBASIC10.57□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm18195-201ENSMUST00000207604 706 ntBASIC10.57□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 AC159295.1-201ENSMUST00000225326 940 ntBASIC10.57□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 AC158538.1-201ENSMUST00000225870 294 ntBASIC10.57□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.57□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm13823-201ENSMUST00000119930 345 ntBASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Ighv8-7-201ENSMUST00000194349 297 ntBASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm43073-201ENSMUST00000198200 1189 ntBASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm9449-201ENSMUST00000207265 1011 ntBASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm42466-201ENSMUST00000202099 1301 ntBASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm44414-201ENSMUST00000203660 2109 ntBASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm4782-201ENSMUST00000168705 2046 ntBASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm37714-201ENSMUST00000194742 342 ntBASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm17968-201ENSMUST00000194902 784 ntBASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm5864-201ENSMUST00000202263 970 ntBASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 AC131187.1-201ENSMUST00000224567 809 ntBASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Gm45751-201ENSMUST00000210185 1573 ntBASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms