Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Scn2bQ56A07 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Scn2bQ56A07 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Scn2bQ56A07 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Scn2bQ56A07 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Scn2bQ56A07 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Scn2bQ56A07 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scn2bQ56A07 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.45□□□□□ -0.26
Scn2bQ56A07 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.45□□□□□ -0.26
Scn2bQ56A07 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Gm14767-201ENSMUST00000121559 586 ntBASIC13.45□□□□□ -0.26
Scn2bQ56A07 Mir1897-201ENSMUST00000122581 272 ntBASIC13.45□□□□□ -0.26
Scn2bQ56A07 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Scn2bQ56A07 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.45□□□□□ -0.26
Scn2bQ56A07 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.45□□□□□ -0.26
Scn2bQ56A07 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.45□□□□□ -0.26
Scn2bQ56A07 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.45□□□□□ -0.26
Scn2bQ56A07 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.45□□□□□ -0.26
Scn2bQ56A07 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.45□□□□□ -0.26
Scn2bQ56A07 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scn2bQ56A07 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.44□□□□□ -0.26
Scn2bQ56A07 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Gm27533-201ENSMUST00000183800 152 ntBASIC13.44□□□□□ -0.26
Scn2bQ56A07 Gm38294-201ENSMUST00000192831 381 ntBASIC13.44□□□□□ -0.26
Scn2bQ56A07 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.44□□□□□ -0.26
Scn2bQ56A07 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Scn2bQ56A07 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms