Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne3Q4FZC9 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.45□□□□□ -0.1
Syne3Q4FZC9 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne3Q4FZC9 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne3Q4FZC9 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne3Q4FZC9 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne3Q4FZC9 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne3Q4FZC9 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Syne3Q4FZC9 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne3Q4FZC9 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Syne3Q4FZC9 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Syne3Q4FZC9 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne3Q4FZC9 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Syne3Q4FZC9 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.45□□□□□ -0.1
Syne3Q4FZC9 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne3Q4FZC9 Gm29741-201ENSMUST00000192667 421 ntBASIC14.45□□□□□ -0.1
Syne3Q4FZC9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne3Q4FZC9 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.45□□□□□ -0.1
Syne3Q4FZC9 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.45□□□□□ -0.1
Syne3Q4FZC9 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne3Q4FZC9 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne3Q4FZC9 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Syne3Q4FZC9 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne3Q4FZC9 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Syne3Q4FZC9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne3Q4FZC9 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Syne3Q4FZC9 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne3Q4FZC9 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Syne3Q4FZC9 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.45□□□□□ -0.1
Syne3Q4FZC9 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne3Q4FZC9 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne3Q4FZC9 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Syne3Q4FZC9 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syne3Q4FZC9 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Syt7-204ENSMUST00000223586 1344 ntBASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Syne3Q4FZC9 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Gm9522-201ENSMUST00000182394 926 ntBASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Gm2445-201ENSMUST00000182798 989 ntBASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Syne3Q4FZC9 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Syne3Q4FZC9 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms