Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Gm8213-201ENSMUST00000118191 441 ntBASIC15.85■□□□□ 0.13
Prpf38aQ4FK66 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf38aQ4FK66 Gm8810-201ENSMUST00000172895 754 ntBASIC15.85■□□□□ 0.13
Prpf38aQ4FK66 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf38aQ4FK66 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.85■□□□□ 0.13
Prpf38aQ4FK66 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.85■□□□□ 0.13
Prpf38aQ4FK66 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf38aQ4FK66 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf38aQ4FK66 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf38aQ4FK66 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf38aQ4FK66 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf38aQ4FK66 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf38aQ4FK66 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf38aQ4FK66 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf38aQ4FK66 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf38aQ4FK66 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
Prpf38aQ4FK66 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Prpf38aQ4FK66 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf38aQ4FK66 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf38aQ4FK66 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Gm14660-201ENSMUST00000119809 575 ntBASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Gm27731-201ENSMUST00000185192 107 ntBASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38aQ4FK66 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Prpf38aQ4FK66 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.83■□□□□ 0.13
Prpf38aQ4FK66 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
Prpf38aQ4FK66 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Prpf38aQ4FK66 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.83■□□□□ 0.13
Prpf38aQ4FK66 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf38aQ4FK66 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf38aQ4FK66 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf38aQ4FK66 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Prpf38aQ4FK66 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf38aQ4FK66 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
Prpf38aQ4FK66 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.83■□□□□ 0.12
Prpf38aQ4FK66 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC15.83■□□□□ 0.12
Prpf38aQ4FK66 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.83■□□□□ 0.12
Prpf38aQ4FK66 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Prpf38aQ4FK66 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf38aQ4FK66 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf38aQ4FK66 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf38aQ4FK66 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf38aQ4FK66 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf38aQ4FK66 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf38aQ4FK66 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.83■□□□□ 0.12
Prpf38aQ4FK66 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf38aQ4FK66 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf38aQ4FK66 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf38aQ4FK66 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf38aQ4FK66 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.83■□□□□ 0.12
Prpf38aQ4FK66 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf38aQ4FK66 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf38aQ4FK66 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf38aQ4FK66 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf38aQ4FK66 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.83■□□□□ 0.12
Prpf38aQ4FK66 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf38aQ4FK66 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf38aQ4FK66 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC15.82■□□□□ 0.12
Prpf38aQ4FK66 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms