Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa3Q3UPR0 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Shisa3Q3UPR0 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Shisa3Q3UPR0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa3Q3UPR0 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC11.75□□□□□ -0.53
Shisa3Q3UPR0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Shisa3Q3UPR0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa3Q3UPR0 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Shisa3Q3UPR0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Shisa3Q3UPR0 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa3Q3UPR0 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Shisa3Q3UPR0 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa3Q3UPR0 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa3Q3UPR0 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Shisa3Q3UPR0 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa3Q3UPR0 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.75□□□□□ -0.53
Shisa3Q3UPR0 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa3Q3UPR0 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa3Q3UPR0 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.75□□□□□ -0.53
Shisa3Q3UPR0 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa3Q3UPR0 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa3Q3UPR0 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa3Q3UPR0 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Shisa3Q3UPR0 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa3Q3UPR0 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Shisa3Q3UPR0 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Gm38225-201ENSMUST00000194001 393 ntBASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Gm5312-201ENSMUST00000203728 547 ntBASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 AC132446.1-201ENSMUST00000222655 226 ntBASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.74□□□□□ -0.53
Shisa3Q3UPR0 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms