Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.91■□□□□ 0.14
Col5a2Q3U962 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col5a2Q3U962 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC15.91■□□□□ 0.14
Col5a2Q3U962 Gm12134-201ENSMUST00000122109 520 ntBASIC15.91■□□□□ 0.14
Col5a2Q3U962 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Col5a2Q3U962 Gm22121-201ENSMUST00000175148 54 ntBASIC15.91■□□□□ 0.14
Col5a2Q3U962 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col5a2Q3U962 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC15.91■□□□□ 0.14
Col5a2Q3U962 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC15.91■□□□□ 0.14
Col5a2Q3U962 AC131330.1-201ENSMUST00000227814 1015 ntBASIC15.91■□□□□ 0.14
Col5a2Q3U962 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col5a2Q3U962 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col5a2Q3U962 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Col5a2Q3U962 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.9■□□□□ 0.14
Col5a2Q3U962 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.9■□□□□ 0.14
Col5a2Q3U962 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.9■□□□□ 0.14
Col5a2Q3U962 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col5a2Q3U962 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col5a2Q3U962 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col5a2Q3U962 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Col5a2Q3U962 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.9■□□□□ 0.14
Col5a2Q3U962 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col5a2Q3U962 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col5a2Q3U962 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col5a2Q3U962 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col5a2Q3U962 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col5a2Q3U962 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC15.9■□□□□ 0.14
Col5a2Q3U962 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC15.9■□□□□ 0.14
Col5a2Q3U962 Gm10109-202ENSMUST00000206890 1211 ntBASIC15.9■□□□□ 0.14
Col5a2Q3U962 Gm44772-201ENSMUST00000207623 1191 ntBASIC15.9■□□□□ 0.14
Col5a2Q3U962 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col5a2Q3U962 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.9■□□□□ 0.14
Col5a2Q3U962 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col5a2Q3U962 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col5a2Q3U962 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.89■□□□□ 0.14
Col5a2Q3U962 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
Col5a2Q3U962 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col5a2Q3U962 Gm5846-201ENSMUST00000193146 1414 ntBASIC15.89■□□□□ 0.13
Col5a2Q3U962 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.89■□□□□ 0.13
Col5a2Q3U962 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col5a2Q3U962 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Col5a2Q3U962 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Col5a2Q3U962 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col5a2Q3U962 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col5a2Q3U962 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col5a2Q3U962 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Col5a2Q3U962 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col5a2Q3U962 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col5a2Q3U962 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC15.89■□□□□ 0.13
Col5a2Q3U962 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC15.89■□□□□ 0.13
Col5a2Q3U962 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Col5a2Q3U962 Gm26956-201ENSMUST00000182176 986 ntBASIC15.89■□□□□ 0.13
Col5a2Q3U962 Gm7467-201ENSMUST00000185173 652 ntBASIC15.89■□□□□ 0.13
Col5a2Q3U962 Gm44405-201ENSMUST00000198952 126 ntBASIC15.89■□□□□ 0.13
Col5a2Q3U962 Gm43378-201ENSMUST00000199336 582 ntBASIC15.89■□□□□ 0.13
Col5a2Q3U962 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Col5a2Q3U962 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col5a2Q3U962 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col5a2Q3U962 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col5a2Q3U962 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Col5a2Q3U962 n-R5s77-201ENSMUST00000083757 119 ntBASIC15.89■□□□□ 0.13
Col5a2Q3U962 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.89■□□□□ 0.13
Col5a2Q3U962 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col5a2Q3U962 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col5a2Q3U962 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col5a2Q3U962 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col5a2Q3U962 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.88■□□□□ 0.13
Col5a2Q3U962 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col5a2Q3U962 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col5a2Q3U962 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col5a2Q3U962 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col5a2Q3U962 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col5a2Q3U962 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.88■□□□□ 0.13
Col5a2Q3U962 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col5a2Q3U962 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.88■□□□□ 0.13
Col5a2Q3U962 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Col5a2Q3U962 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC15.88■□□□□ 0.13
Col5a2Q3U962 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col5a2Q3U962 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col5a2Q3U962 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col5a2Q3U962 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col5a2Q3U962 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col5a2Q3U962 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.88■□□□□ 0.13
Col5a2Q3U962 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col5a2Q3U962 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.88■□□□□ 0.13
Col5a2Q3U962 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col5a2Q3U962 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col5a2Q3U962 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Col5a2Q3U962 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col5a2Q3U962 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col5a2Q3U962 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col5a2Q3U962 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col5a2Q3U962 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col5a2Q3U962 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col5a2Q3U962 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC15.87■□□□□ 0.13
Col5a2Q3U962 Gm14109-201ENSMUST00000118814 309 ntBASIC15.87■□□□□ 0.13
Col5a2Q3U962 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC15.87■□□□□ 0.13
Col5a2Q3U962 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col5a2Q3U962 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col5a2Q3U962 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms