Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ssbp4Q3U4B1 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ssbp4Q3U4B1 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ssbp4Q3U4B1 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ssbp4Q3U4B1 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ssbp4Q3U4B1 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ssbp4Q3U4B1 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ssbp4Q3U4B1 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ssbp4Q3U4B1 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ssbp4Q3U4B1 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ssbp4Q3U4B1 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Mir7085-201ENSMUST00000184353 66 ntBASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Gm29649-201ENSMUST00000185649 419 ntBASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Itm2b-204ENSMUST00000228637 783 ntBASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Ssbp4Q3U4B1 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Mir1982-201ENSMUST00000157368 74 ntBASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.4□□□□□ -0.58
Ssbp4Q3U4B1 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms