Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cul4aQ3TCH7 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Gm11594-201ENSMUST00000122313 162 ntBASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cul4aQ3TCH7 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.27□□□□□ -0.12
Cul4aQ3TCH7 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cul4aQ3TCH7 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cul4aQ3TCH7 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cul4aQ3TCH7 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cul4aQ3TCH7 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cul4aQ3TCH7 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cul4aQ3TCH7 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cul4aQ3TCH7 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cul4aQ3TCH7 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cul4aQ3TCH7 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.27□□□□□ -0.12
Cul4aQ3TCH7 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cul4aQ3TCH7 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.27□□□□□ -0.12
Cul4aQ3TCH7 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Cul4aQ3TCH7 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cul4aQ3TCH7 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Cul4aQ3TCH7 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.27□□□□□ -0.12
Cul4aQ3TCH7 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cul4aQ3TCH7 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Cul4aQ3TCH7 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cul4aQ3TCH7 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cul4aQ3TCH7 Gm27680-201ENSMUST00000184192 160 ntBASIC14.27□□□□□ -0.13
Cul4aQ3TCH7 Gm27321-201ENSMUST00000185021 205 ntBASIC14.27□□□□□ -0.13
Cul4aQ3TCH7 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.27□□□□□ -0.13
Cul4aQ3TCH7 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.27□□□□□ -0.13
Cul4aQ3TCH7 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cul4aQ3TCH7 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.27□□□□□ -0.13
Cul4aQ3TCH7 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cul4aQ3TCH7 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cul4aQ3TCH7 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cul4aQ3TCH7 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cul4aQ3TCH7 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cul4aQ3TCH7 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cul4aQ3TCH7 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cul4aQ3TCH7 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.27□□□□□ -0.13
Cul4aQ3TCH7 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cul4aQ3TCH7 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Cul4aQ3TCH7 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cul4aQ3TCH7 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cul4aQ3TCH7 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cul4aQ3TCH7 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms