Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3KNL4 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Q3KNL4 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.36□□□□□ -0.27
Q3KNL4 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3KNL4 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Q3KNL4 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3KNL4 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3KNL4 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Q3KNL4 Mir698-201ENSMUST00000102164 109 ntBASIC13.36□□□□□ -0.27
Q3KNL4 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.36□□□□□ -0.27
Q3KNL4 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.36□□□□□ -0.27
Q3KNL4 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Q3KNL4 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.36□□□□□ -0.27
Q3KNL4 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Q3KNL4 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.36□□□□□ -0.27
Q3KNL4 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.36□□□□□ -0.27
Q3KNL4 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Q3KNL4 Mir497b-201ENSMUST00000093601 125 ntBASIC13.36□□□□□ -0.27
Q3KNL4 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Q3KNL4 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3KNL4 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3KNL4 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Q3KNL4 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Q3KNL4 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3KNL4 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Q3KNL4 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3KNL4 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Q3KNL4 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Q3KNL4 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Q3KNL4 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3KNL4 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3KNL4 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Q3KNL4 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Q3KNL4 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3KNL4 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3KNL4 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3KNL4 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q3KNL4 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q3KNL4 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.35□□□□□ -0.27
Q3KNL4 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q3KNL4 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Q3KNL4 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q3KNL4 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q3KNL4 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q3KNL4 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q3KNL4 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.35□□□□□ -0.27
Q3KNL4 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q3KNL4 Mir449b-201ENSMUST00000104833 80 ntBASIC13.35□□□□□ -0.27
Q3KNL4 Gm15460-201ENSMUST00000118147 391 ntBASIC13.35□□□□□ -0.27
Q3KNL4 Gm15653-201ENSMUST00000119247 907 ntBASIC13.35□□□□□ -0.27
Q3KNL4 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.35□□□□□ -0.27
Q3KNL4 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q3KNL4 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Q3KNL4 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.35□□□□□ -0.27
Q3KNL4 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Q3KNL4 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Q3KNL4 Gm5312-201ENSMUST00000203728 547 ntBASIC13.35□□□□□ -0.27
Q3KNL4 Chchd1-203ENSMUST00000224633 557 ntBASIC13.35□□□□□ -0.27
Q3KNL4 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q3KNL4 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q3KNL4 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Q3KNL4 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q3KNL4 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q3KNL4 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Q3KNL4 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Q3KNL4 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q3KNL4 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Q3KNL4 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.35□□□□□ -0.27
Q3KNL4 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q3KNL4 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q3KNL4 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.35□□□□□ -0.27
Q3KNL4 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Q3KNL4 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Q3KNL4 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Q3KNL4 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Q3KNL4 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Q3KNL4 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Q3KNL4 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Q3KNL4 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Q3KNL4 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.34□□□□□ -0.27
Q3KNL4 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Q3KNL4 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Q3KNL4 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.34□□□□□ -0.27
Q3KNL4 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Q3KNL4 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Q3KNL4 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Q3KNL4 Gm21470-201ENSMUST00000187680 696 ntBASIC13.34□□□□□ -0.27
Q3KNL4 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.34□□□□□ -0.27
Q3KNL4 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.34□□□□□ -0.27
Q3KNL4 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.34□□□□□ -0.27
Q3KNL4 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.34□□□□□ -0.27
Q3KNL4 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.34□□□□□ -0.27
Q3KNL4 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Q3KNL4 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Q3KNL4 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Q3KNL4 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Q3KNL4 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Q3KNL4 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Q3KNL4 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Q3KNL4 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms