Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm5210-201ENSMUST00000182150 1010 ntBASIC6.98□□□□□ -1.29
Ush2AQ2QI47 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Gm37166-201ENSMUST00000195473 2474 ntBASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Gm11422-201ENSMUST00000118925 1103 ntBASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Gm3433-201ENSMUST00000210149 1058 ntBASIC6.98□□□□□ -1.29
Ush2AQ2QI47 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Gm37859-201ENSMUST00000195529 2173 ntBASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Gm8018-201ENSMUST00000173536 789 ntBASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Gm23363-201ENSMUST00000175024 79 ntBASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Gm23596-201ENSMUST00000104304 132 ntBASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Gm12337-201ENSMUST00000119634 400 ntBASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Gm28882-201ENSMUST00000185504 314 ntBASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Lgi3-203ENSMUST00000226548 1001 ntBASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ush2AQ2QI47 Gm13624-201ENSMUST00000120263 462 ntBASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Gm2875-201ENSMUST00000211333 360 ntBASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Gm11952-201ENSMUST00000121172 821 ntBASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Gm13916-201ENSMUST00000117368 628 ntBASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ush2AQ2QI47 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC6.97□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms