Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col9a2Q07643 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.68□□□□□ -0.06
Col9a2Q07643 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.68□□□□□ -0.06
Col9a2Q07643 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col9a2Q07643 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.68□□□□□ -0.06
Col9a2Q07643 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.68□□□□□ -0.06
Col9a2Q07643 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Col9a2Q07643 Gm38144-201ENSMUST00000192790 465 ntBASIC14.68□□□□□ -0.06
Col9a2Q07643 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.68□□□□□ -0.06
Col9a2Q07643 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Col9a2Q07643 Gm9823-201ENSMUST00000051212 327 ntBASIC14.68□□□□□ -0.06
Col9a2Q07643 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Col9a2Q07643 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col9a2Q07643 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col9a2Q07643 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col9a2Q07643 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.68□□□□□ -0.06
Col9a2Q07643 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col9a2Q07643 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col9a2Q07643 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col9a2Q07643 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col9a2Q07643 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.68□□□□□ -0.06
Col9a2Q07643 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col9a2Q07643 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col9a2Q07643 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col9a2Q07643 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col9a2Q07643 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a2Q07643 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a2Q07643 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Col9a2Q07643 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Col9a2Q07643 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.67□□□□□ -0.06
Col9a2Q07643 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a2Q07643 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a2Q07643 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a2Q07643 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a2Q07643 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.67□□□□□ -0.06
Col9a2Q07643 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a2Q07643 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a2Q07643 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Col9a2Q07643 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.67□□□□□ -0.06
Col9a2Q07643 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.67□□□□□ -0.06
Col9a2Q07643 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Col9a2Q07643 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.67□□□□□ -0.06
Col9a2Q07643 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.67□□□□□ -0.06
Col9a2Q07643 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a2Q07643 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.67□□□□□ -0.06
Col9a2Q07643 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a2Q07643 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a2Q07643 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a2Q07643 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a2Q07643 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a2Q07643 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a2Q07643 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a2Q07643 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a2Q07643 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.67□□□□□ -0.06
Col9a2Q07643 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a2Q07643 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a2Q07643 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a2Q07643 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a2Q07643 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col9a2Q07643 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.66□□□□□ -0.06
Col9a2Q07643 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.66□□□□□ -0.06
Col9a2Q07643 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.66□□□□□ -0.06
Col9a2Q07643 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col9a2Q07643 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col9a2Q07643 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col9a2Q07643 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col9a2Q07643 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col9a2Q07643 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col9a2Q07643 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col9a2Q07643 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col9a2Q07643 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col9a2Q07643 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.66□□□□□ -0.06
Col9a2Q07643 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.66□□□□□ -0.06
Col9a2Q07643 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Col9a2Q07643 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col9a2Q07643 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col9a2Q07643 Gm22018-201ENSMUST00000104357 131 ntBASIC14.66□□□□□ -0.06
Col9a2Q07643 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.66□□□□□ -0.06
Col9a2Q07643 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Col9a2Q07643 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Col9a2Q07643 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.66□□□□□ -0.06
Col9a2Q07643 Gm5187-201ENSMUST00000117317 991 ntBASIC14.66□□□□□ -0.06
Col9a2Q07643 Gm12742-201ENSMUST00000117326 410 ntBASIC14.66□□□□□ -0.06
Col9a2Q07643 Gm8213-201ENSMUST00000118191 441 ntBASIC14.66□□□□□ -0.06
Col9a2Q07643 Gm13123-201ENSMUST00000122173 492 ntBASIC14.66□□□□□ -0.06
Col9a2Q07643 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.66□□□□□ -0.06
Col9a2Q07643 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
Col9a2Q07643 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Col9a2Q07643 Gm42693-201ENSMUST00000196779 631 ntBASIC14.66□□□□□ -0.06
Col9a2Q07643 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Col9a2Q07643 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.66□□□□□ -0.06
Col9a2Q07643 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col9a2Q07643 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.66□□□□□ -0.06
Col9a2Q07643 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.66□□□□□ -0.06
Col9a2Q07643 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col9a2Q07643 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col9a2Q07643 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col9a2Q07643 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col9a2Q07643 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.66□□□□□ -0.06
Col9a2Q07643 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms