Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Hspg2Q05793 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Hspg2Q05793 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC9.73□□□□□ -0.85
Hspg2Q05793 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Hspg2Q05793 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Hspg2Q05793 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Hspg2Q05793 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Hspg2Q05793 Gm13665-201ENSMUST00000120830 528 ntBASIC9.73□□□□□ -0.85
Hspg2Q05793 Gm28693-202ENSMUST00000190758 331 ntBASIC9.73□□□□□ -0.85
Hspg2Q05793 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC9.73□□□□□ -0.85
Hspg2Q05793 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Hspg2Q05793 Gm9004-201ENSMUST00000218739 1222 ntBASIC9.73□□□□□ -0.85
Hspg2Q05793 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Hspg2Q05793 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC9.73□□□□□ -0.85
Hspg2Q05793 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Hspg2Q05793 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Hspg2Q05793 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Hspg2Q05793 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Hspg2Q05793 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Hspg2Q05793 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Hspg2Q05793 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Hspg2Q05793 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Hspg2Q05793 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Hspg2Q05793 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Hspg2Q05793 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Hspg2Q05793 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Hspg2Q05793 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC9.73□□□□□ -0.85
Hspg2Q05793 Gm11930-201ENSMUST00000117788 190 ntBASIC9.73□□□□□ -0.85
Hspg2Q05793 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC9.73□□□□□ -0.85
Hspg2Q05793 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Hspg2Q05793 Gm25700-201ENSMUST00000177693 110 ntBASIC9.73□□□□□ -0.85
Hspg2Q05793 Mir6546-201ENSMUST00000184460 62 ntBASIC9.73□□□□□ -0.85
Hspg2Q05793 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC9.73□□□□□ -0.85
Hspg2Q05793 Gm38144-201ENSMUST00000192790 465 ntBASIC9.73□□□□□ -0.85
Hspg2Q05793 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Hspg2Q05793 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Hspg2Q05793 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC9.73□□□□□ -0.85
Hspg2Q05793 Gm5950-201ENSMUST00000213337 772 ntBASIC9.73□□□□□ -0.85
Hspg2Q05793 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Hspg2Q05793 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Hspg2Q05793 Gm8617-201ENSMUST00000118796 2222 ntBASIC9.73□□□□□ -0.85
Hspg2Q05793 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Hspg2Q05793 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Hspg2Q05793 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Hspg2Q05793 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Hspg2Q05793 Gm45242-201ENSMUST00000210666 2129 ntBASIC9.73□□□□□ -0.85
Hspg2Q05793 Crry-ps-201ENSMUST00000079090 1309 ntBASIC9.73□□□□□ -0.85
Hspg2Q05793 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
Hspg2Q05793 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Hspg2Q05793 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Hspg2Q05793 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Hspg2Q05793 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Hspg2Q05793 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Hspg2Q05793 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hspg2Q05793 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC9.72□□□□□ -0.85
Hspg2Q05793 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC9.72□□□□□ -0.85
Hspg2Q05793 Gm18734-201ENSMUST00000172937 808 ntBASIC9.72□□□□□ -0.85
Hspg2Q05793 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hspg2Q05793 Gm44136-201ENSMUST00000203819 1106 ntBASIC9.72□□□□□ -0.85
Hspg2Q05793 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC9.72□□□□□ -0.85
Hspg2Q05793 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hspg2Q05793 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC9.72□□□□□ -0.85
Hspg2Q05793 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC9.72□□□□□ -0.85
Hspg2Q05793 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
Hspg2Q05793 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hspg2Q05793 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hspg2Q05793 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hspg2Q05793 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Hspg2Q05793 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Hspg2Q05793 Gm42872-201ENSMUST00000200026 1967 ntBASIC9.72□□□□□ -0.85
Hspg2Q05793 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Hspg2Q05793 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Hspg2Q05793 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC9.72□□□□□ -0.85
Hspg2Q05793 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Hspg2Q05793 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Hspg2Q05793 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Hspg2Q05793 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC9.72□□□□□ -0.85
Hspg2Q05793 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hspg2Q05793 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Hspg2Q05793 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hspg2Q05793 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Hspg2Q05793 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hspg2Q05793 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hspg2Q05793 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Hspg2Q05793 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC9.72□□□□□ -0.85
Hspg2Q05793 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC9.72□□□□□ -0.85
Hspg2Q05793 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hspg2Q05793 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hspg2Q05793 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hspg2Q05793 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Hspg2Q05793 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hspg2Q05793 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Hspg2Q05793 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Hspg2Q05793 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Hspg2Q05793 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hspg2Q05793 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Hspg2Q05793 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Hspg2Q05793 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC9.72□□□□□ -0.85
Hspg2Q05793 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC9.72□□□□□ -0.85
Hspg2Q05793 AC123665.1-201ENSMUST00000228204 438 ntBASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms