Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Gabpb1Q00420 Gm21854-201ENSMUST00000179901 471 ntBASIC13.81□□□□□ -0.2
Gabpb1Q00420 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gabpb1Q00420 Gm20445-201ENSMUST00000061905 565 ntBASIC13.81□□□□□ -0.2
Gabpb1Q00420 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Gabpb1Q00420 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gabpb1Q00420 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Gabpb1Q00420 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gabpb1Q00420 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gabpb1Q00420 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.81□□□□□ -0.2
Gabpb1Q00420 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gabpb1Q00420 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gabpb1Q00420 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gabpb1Q00420 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gabpb1Q00420 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.81□□□□□ -0.2
Gabpb1Q00420 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gabpb1Q00420 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gabpb1Q00420 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Gabpb1Q00420 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gabpb1Q00420 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Gabpb1Q00420 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Mir7023-201ENSMUST00000185093 64 ntBASIC13.8□□□□□ -0.2
Gabpb1Q00420 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gabpb1Q00420 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gabpb1Q00420 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gabpb1Q00420 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Acot6-202ENSMUST00000222921 3622 ntBASIC13.79□□□□□ -0.2
Gabpb1Q00420 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Gm15487-201ENSMUST00000122373 465 ntBASIC13.79□□□□□ -0.2
Gabpb1Q00420 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Gm20949-201ENSMUST00000206478 952 ntBASIC13.79□□□□□ -0.2
Gabpb1Q00420 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Gm17330-201ENSMUST00000221047 165 ntBASIC13.79□□□□□ -0.2
Gabpb1Q00420 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.79□□□□□ -0.2
Gabpb1Q00420 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.79□□□□□ -0.2
Gabpb1Q00420 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.79□□□□□ -0.2
Gabpb1Q00420 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Gabpb1Q00420 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gabpb1Q00420 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.78□□□□□ -0.2
Gabpb1Q00420 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.78□□□□□ -0.2
Gabpb1Q00420 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms