Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lig3P97386 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lig3P97386 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lig3P97386 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lig3P97386 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lig3P97386 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lig3P97386 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lig3P97386 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Lig3P97386 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lig3P97386 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lig3P97386 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.87□□□□□ -0.03
Lig3P97386 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Lig3P97386 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.87□□□□□ -0.03
Lig3P97386 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.87□□□□□ -0.03
Lig3P97386 Gm42693-201ENSMUST00000196779 631 ntBASIC14.87□□□□□ -0.03
Lig3P97386 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.87□□□□□ -0.03
Lig3P97386 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lig3P97386 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lig3P97386 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.87□□□□□ -0.03
Lig3P97386 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lig3P97386 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lig3P97386 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lig3P97386 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lig3P97386 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lig3P97386 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lig3P97386 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.87□□□□□ -0.03
Lig3P97386 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lig3P97386 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.87□□□□□ -0.03
Lig3P97386 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lig3P97386 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lig3P97386 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lig3P97386 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Lig3P97386 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lig3P97386 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lig3P97386 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.86□□□□□ -0.03
Lig3P97386 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Lig3P97386 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
Lig3P97386 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.86□□□□□ -0.03
Lig3P97386 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lig3P97386 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lig3P97386 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lig3P97386 Gm12341-201ENSMUST00000119724 503 ntBASIC14.86□□□□□ -0.03
Lig3P97386 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Lig3P97386 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lig3P97386 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lig3P97386 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.86□□□□□ -0.03
Lig3P97386 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lig3P97386 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.86□□□□□ -0.03
Lig3P97386 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lig3P97386 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lig3P97386 Gm10478-201ENSMUST00000084451 396 ntBASIC14.86□□□□□ -0.03
Lig3P97386 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lig3P97386 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lig3P97386 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lig3P97386 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.86□□□□□ -0.03
Lig3P97386 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.86□□□□□ -0.03
Lig3P97386 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lig3P97386 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.86□□□□□ -0.03
Lig3P97386 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lig3P97386 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lig3P97386 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lig3P97386 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lig3P97386 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Lig3P97386 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lig3P97386 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lig3P97386 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Lig3P97386 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lig3P97386 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Lig3P97386 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.85□□□□□ -0.03
Lig3P97386 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lig3P97386 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lig3P97386 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lig3P97386 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.85□□□□□ -0.03
Lig3P97386 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.85□□□□□ -0.03
Lig3P97386 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lig3P97386 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.85□□□□□ -0.03
Lig3P97386 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Lig3P97386 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.85□□□□□ -0.03
Lig3P97386 Gm27839-201ENSMUST00000184242 106 ntBASIC14.85□□□□□ -0.03
Lig3P97386 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.85□□□□□ -0.03
Lig3P97386 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.85□□□□□ -0.03
Lig3P97386 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lig3P97386 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.85□□□□□ -0.03
Lig3P97386 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Lig3P97386 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lig3P97386 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lig3P97386 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lig3P97386 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lig3P97386 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.85□□□□□ -0.03
Lig3P97386 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.85□□□□□ -0.03
Lig3P97386 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lig3P97386 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Lig3P97386 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lig3P97386 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.85□□□□□ -0.03
Lig3P97386 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.85□□□□□ -0.03
Lig3P97386 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lig3P97386 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lig3P97386 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lig3P97386 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lig3P97386 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 106.1 ms