Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim43cP86449 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.77□□□□□ -0.05
Trim43cP86449 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim43cP86449 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim43cP86449 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim43cP86449 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim43cP86449 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim43cP86449 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim43cP86449 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.77□□□□□ -0.05
Trim43cP86449 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trim43cP86449 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim43cP86449 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim43cP86449 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim43cP86449 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim43cP86449 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim43cP86449 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim43cP86449 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim43cP86449 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim43cP86449 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim43cP86449 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.76□□□□□ -0.05
Trim43cP86449 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim43cP86449 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim43cP86449 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Trim43cP86449 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim43cP86449 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim43cP86449 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trim43cP86449 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim43cP86449 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim43cP86449 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim43cP86449 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.76□□□□□ -0.05
Trim43cP86449 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trim43cP86449 Grk6-205ENSMUST00000224653 2976 ntBASIC14.76□□□□□ -0.05
Trim43cP86449 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.76□□□□□ -0.05
Trim43cP86449 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim43cP86449 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim43cP86449 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim43cP86449 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim43cP86449 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim43cP86449 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trim43cP86449 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim43cP86449 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim43cP86449 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim43cP86449 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim43cP86449 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim43cP86449 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim43cP86449 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim43cP86449 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim43cP86449 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim43cP86449 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim43cP86449 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim43cP86449 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.75□□□□□ -0.05
Trim43cP86449 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim43cP86449 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.75□□□□□ -0.05
Trim43cP86449 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim43cP86449 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim43cP86449 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trim43cP86449 Gm13689-201ENSMUST00000119360 685 ntBASIC14.75□□□□□ -0.05
Trim43cP86449 Gm12341-201ENSMUST00000119724 503 ntBASIC14.75□□□□□ -0.05
Trim43cP86449 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim43cP86449 Mir6977-201ENSMUST00000184960 64 ntBASIC14.75□□□□□ -0.05
Trim43cP86449 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim43cP86449 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim43cP86449 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.75□□□□□ -0.05
Trim43cP86449 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim43cP86449 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim43cP86449 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim43cP86449 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Trim43cP86449 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim43cP86449 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim43cP86449 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim43cP86449 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim43cP86449 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trim43cP86449 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim43cP86449 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim43cP86449 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim43cP86449 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim43cP86449 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43cP86449 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43cP86449 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43cP86449 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43cP86449 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43cP86449 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Trim43cP86449 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43cP86449 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43cP86449 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Trim43cP86449 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43cP86449 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trim43cP86449 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43cP86449 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43cP86449 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Trim43cP86449 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trim43cP86449 Gm12859-201ENSMUST00000117834 427 ntBASIC14.74□□□□□ -0.05
Trim43cP86449 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43cP86449 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.74□□□□□ -0.05
Trim43cP86449 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.74□□□□□ -0.05
Trim43cP86449 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43cP86449 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.74□□□□□ -0.05
Trim43cP86449 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43cP86449 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.74□□□□□ -0.05
Trim43cP86449 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms