Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SgcbP82349 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcbP82349 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.13□□□□□ -0.47
SgcbP82349 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcbP82349 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcbP82349 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SgcbP82349 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.13□□□□□ -0.47
SgcbP82349 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcbP82349 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SgcbP82349 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcbP82349 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcbP82349 Gm11524-201ENSMUST00000119349 807 ntBASIC12.13□□□□□ -0.47
SgcbP82349 Gm12341-201ENSMUST00000119724 503 ntBASIC12.13□□□□□ -0.47
SgcbP82349 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.13□□□□□ -0.47
SgcbP82349 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.13□□□□□ -0.47
SgcbP82349 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.13□□□□□ -0.47
SgcbP82349 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.13□□□□□ -0.47
SgcbP82349 Gm45668-201ENSMUST00000211271 493 ntBASIC12.13□□□□□ -0.47
SgcbP82349 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.13□□□□□ -0.47
SgcbP82349 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.13□□□□□ -0.47
SgcbP82349 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.13□□□□□ -0.47
SgcbP82349 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
SgcbP82349 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
SgcbP82349 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SgcbP82349 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcbP82349 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcbP82349 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcbP82349 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SgcbP82349 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcbP82349 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcbP82349 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SgcbP82349 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcbP82349 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcbP82349 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcbP82349 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcbP82349 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.13□□□□□ -0.47
SgcbP82349 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.13□□□□□ -0.47
SgcbP82349 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SgcbP82349 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcbP82349 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcbP82349 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcbP82349 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SgcbP82349 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcbP82349 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SgcbP82349 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcbP82349 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcbP82349 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcbP82349 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
SgcbP82349 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SgcbP82349 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SgcbP82349 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.12□□□□□ -0.47
SgcbP82349 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcbP82349 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcbP82349 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SgcbP82349 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcbP82349 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcbP82349 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.12□□□□□ -0.47
SgcbP82349 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.12□□□□□ -0.47
SgcbP82349 Gm19078-201ENSMUST00000206311 727 ntBASIC12.12□□□□□ -0.47
SgcbP82349 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcbP82349 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcbP82349 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcbP82349 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.12□□□□□ -0.47
SgcbP82349 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcbP82349 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcbP82349 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcbP82349 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SgcbP82349 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcbP82349 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcbP82349 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcbP82349 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SgcbP82349 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcbP82349 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SgcbP82349 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SgcbP82349 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SgcbP82349 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SgcbP82349 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Gm11424-201ENSMUST00000121929 829 ntBASIC12.11□□□□□ -0.47
SgcbP82349 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.11□□□□□ -0.47
SgcbP82349 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.11□□□□□ -0.47
SgcbP82349 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Gm9794-201ENSMUST00000202370 423 ntBASIC12.11□□□□□ -0.47
SgcbP82349 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.11□□□□□ -0.47
SgcbP82349 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
SgcbP82349 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms