Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
SgcdP82347 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SgcdP82347 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SgcdP82347 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.63□□□□□ -0.39
SgcdP82347 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.63□□□□□ -0.39
SgcdP82347 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SgcdP82347 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
SgcdP82347 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.63□□□□□ -0.39
SgcdP82347 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SgcdP82347 Gm27430-201ENSMUST00000184585 107 ntBASIC12.63□□□□□ -0.39
SgcdP82347 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SgcdP82347 Gm43474-201ENSMUST00000196415 774 ntBASIC12.63□□□□□ -0.39
SgcdP82347 Gm44333-201ENSMUST00000197168 107 ntBASIC12.63□□□□□ -0.39
SgcdP82347 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.63□□□□□ -0.39
SgcdP82347 Gm45612-201ENSMUST00000211320 160 ntBASIC12.63□□□□□ -0.39
SgcdP82347 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.63□□□□□ -0.39
SgcdP82347 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.63□□□□□ -0.39
SgcdP82347 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.63□□□□□ -0.39
SgcdP82347 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.63□□□□□ -0.39
SgcdP82347 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.63□□□□□ -0.39
SgcdP82347 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SgcdP82347 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SgcdP82347 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.63□□□□□ -0.39
SgcdP82347 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
SgcdP82347 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.62□□□□□ -0.39
SgcdP82347 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.62□□□□□ -0.39
SgcdP82347 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.62□□□□□ -0.39
SgcdP82347 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.62□□□□□ -0.39
SgcdP82347 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.62□□□□□ -0.39
SgcdP82347 Gm18889-201ENSMUST00000174284 929 ntBASIC12.62□□□□□ -0.39
SgcdP82347 Gm22175-201ENSMUST00000175007 78 ntBASIC12.62□□□□□ -0.39
SgcdP82347 Gm5745-201ENSMUST00000183748 313 ntBASIC12.62□□□□□ -0.39
SgcdP82347 Gm43125-201ENSMUST00000201724 730 ntBASIC12.62□□□□□ -0.39
SgcdP82347 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.62□□□□□ -0.39
SgcdP82347 Thap2-203ENSMUST00000218989 527 ntBASIC12.62□□□□□ -0.39
SgcdP82347 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.62□□□□□ -0.39
SgcdP82347 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.62□□□□□ -0.39
SgcdP82347 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcdP82347 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SgcdP82347 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.62□□□□□ -0.39
SgcdP82347 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SgcdP82347 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
SgcdP82347 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SgcdP82347 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms