Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ybx1P62960 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ybx1P62960 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ybx1P62960 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ybx1P62960 Gm14723-201ENSMUST00000118686 215 ntBASIC13.89□□□□□ -0.19
Ybx1P62960 Gm13369-201ENSMUST00000119442 987 ntBASIC13.89□□□□□ -0.19
Ybx1P62960 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ybx1P62960 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ybx1P62960 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.89□□□□□ -0.19
Ybx1P62960 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.89□□□□□ -0.19
Ybx1P62960 Gm27516-201ENSMUST00000184237 98 ntBASIC13.89□□□□□ -0.19
Ybx1P62960 Gm38002-201ENSMUST00000193255 180 ntBASIC13.89□□□□□ -0.19
Ybx1P62960 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.89□□□□□ -0.19
Ybx1P62960 Gm17330-201ENSMUST00000221047 165 ntBASIC13.89□□□□□ -0.19
Ybx1P62960 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.89□□□□□ -0.19
Ybx1P62960 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ybx1P62960 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ybx1P62960 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ybx1P62960 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.89□□□□□ -0.19
Ybx1P62960 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ybx1P62960 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ybx1P62960 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ybx1P62960 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ybx1P62960 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ybx1P62960 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.89□□□□□ -0.19
Ybx1P62960 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ybx1P62960 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ybx1P62960 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ybx1P62960 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ybx1P62960 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ybx1P62960 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ybx1P62960 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ybx1P62960 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ybx1P62960 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ybx1P62960 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ybx1P62960 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ybx1P62960 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ybx1P62960 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ybx1P62960 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ybx1P62960 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ybx1P62960 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ybx1P62960 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ybx1P62960 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ybx1P62960 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Ybx1P62960 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.88□□□□□ -0.19
Ybx1P62960 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ybx1P62960 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ybx1P62960 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.88□□□□□ -0.19
Ybx1P62960 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ybx1P62960 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.88□□□□□ -0.19
Ybx1P62960 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Ybx1P62960 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ybx1P62960 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ybx1P62960 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ybx1P62960 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ybx1P62960 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ybx1P62960 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ybx1P62960 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ybx1P62960 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ybx1P62960 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.87□□□□□ -0.19
Ybx1P62960 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Ybx1P62960 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ybx1P62960 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ybx1P62960 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ybx1P62960 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ybx1P62960 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.87□□□□□ -0.19
Ybx1P62960 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ybx1P62960 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.87□□□□□ -0.19
Ybx1P62960 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ybx1P62960 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ybx1P62960 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ybx1P62960 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ybx1P62960 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ybx1P62960 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ybx1P62960 Gm15770-201ENSMUST00000117498 584 ntBASIC13.87□□□□□ -0.19
Ybx1P62960 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.87□□□□□ -0.19
Ybx1P62960 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.87□□□□□ -0.19
Ybx1P62960 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ybx1P62960 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.87□□□□□ -0.19
Ybx1P62960 Gm37008-201ENSMUST00000195712 319 ntBASIC13.87□□□□□ -0.19
Ybx1P62960 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ybx1P62960 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.87□□□□□ -0.19
Ybx1P62960 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.87□□□□□ -0.19
Ybx1P62960 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ybx1P62960 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ybx1P62960 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ybx1P62960 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.87□□□□□ -0.19
Ybx1P62960 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ybx1P62960 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ybx1P62960 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ybx1P62960 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.87□□□□□ -0.19
Ybx1P62960 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Ybx1P62960 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ybx1P62960 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ybx1P62960 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.87□□□□□ -0.19
Ybx1P62960 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ybx1P62960 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ybx1P62960 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ybx1P62960 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ybx1P62960 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms