Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Gabra1P62812 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gabra1P62812 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gabra1P62812 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gabra1P62812 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Gabra1P62812 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Gabra1P62812 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Gabra1P62812 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Gabra1P62812 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gabra1P62812 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gabra1P62812 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gabra1P62812 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Gabra1P62812 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gabra1P62812 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gabra1P62812 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gabra1P62812 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gabra1P62812 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Gabra1P62812 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Gabra1P62812 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Gabra1P62812 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gabra1P62812 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gabra1P62812 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gabra1P62812 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gabra1P62812 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gabra1P62812 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gabra1P62812 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Gabra1P62812 Gm13036-201ENSMUST00000117799 748 ntBASIC11.42□□□□□ -0.58
Gabra1P62812 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.42□□□□□ -0.58
Gabra1P62812 Gm7862-201ENSMUST00000121461 292 ntBASIC11.42□□□□□ -0.58
Gabra1P62812 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gabra1P62812 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.42□□□□□ -0.58
Gabra1P62812 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.42□□□□□ -0.58
Gabra1P62812 Gm44608-201ENSMUST00000206827 855 ntBASIC11.42□□□□□ -0.58
Gabra1P62812 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gabra1P62812 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gabra1P62812 AC124549.3-201ENSMUST00000225541 367 ntBASIC11.42□□□□□ -0.58
Gabra1P62812 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gabra1P62812 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gabra1P62812 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gabra1P62812 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gabra1P62812 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gabra1P62812 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gabra1P62812 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Gabra1P62812 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gabra1P62812 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Gabra1P62812 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gabra1P62812 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gabra1P62812 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Gabra1P62812 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gabra1P62812 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gabra1P62812 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.42□□□□□ -0.58
Gabra1P62812 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gabra1P62812 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gabra1P62812 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.41□□□□□ -0.58
Gabra1P62812 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gabra1P62812 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Gabra1P62812 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gabra1P62812 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gabra1P62812 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.41□□□□□ -0.58
Gabra1P62812 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gabra1P62812 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Gabra1P62812 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gabra1P62812 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Gabra1P62812 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gabra1P62812 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gabra1P62812 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gabra1P62812 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Gabra1P62812 Gm28033-201ENSMUST00000184224 96 ntBASIC11.41□□□□□ -0.58
Gabra1P62812 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gabra1P62812 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gabra1P62812 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Gabra1P62812 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gabra1P62812 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Gabra1P62812 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gabra1P62812 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Gabra1P62812 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gabra1P62812 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gabra1P62812 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gabra1P62812 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gabra1P62812 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Gabra1P62812 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gabra1P62812 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gabra1P62812 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gabra1P62812 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gabra1P62812 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gabra1P62812 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gabra1P62812 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gabra1P62812 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gabra1P62812 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gabra1P62812 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gabra1P62812 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Gabra1P62812 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gabra1P62812 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gabra1P62812 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Gabra1P62812 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gabra1P62812 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Gabra1P62812 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gabra1P62812 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gabra1P62812 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Gabra1P62812 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms