Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp46P62069 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp46P62069 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.29□□□□□ -0.12
Usp46P62069 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.29□□□□□ -0.12
Usp46P62069 Gm45696-201ENSMUST00000212088 985 ntBASIC14.29□□□□□ -0.12
Usp46P62069 Gm5035-201ENSMUST00000215581 927 ntBASIC14.29□□□□□ -0.12
Usp46P62069 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp46P62069 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp46P62069 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp46P62069 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp46P62069 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.29□□□□□ -0.12
Usp46P62069 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp46P62069 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Usp46P62069 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp46P62069 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp46P62069 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp46P62069 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp46P62069 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp46P62069 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp46P62069 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp46P62069 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp46P62069 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp46P62069 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Usp46P62069 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp46P62069 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp46P62069 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Usp46P62069 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp46P62069 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.28□□□□□ -0.12
Usp46P62069 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp46P62069 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.28□□□□□ -0.12
Usp46P62069 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.28□□□□□ -0.12
Usp46P62069 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp46P62069 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp46P62069 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp46P62069 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp46P62069 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp46P62069 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp46P62069 Gm2445-201ENSMUST00000182798 989 ntBASIC14.28□□□□□ -0.12
Usp46P62069 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp46P62069 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp46P62069 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp46P62069 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp46P62069 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.28□□□□□ -0.12
Usp46P62069 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Usp46P62069 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp46P62069 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp46P62069 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp46P62069 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp46P62069 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp46P62069 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp46P62069 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp46P62069 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp46P62069 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp46P62069 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp46P62069 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp46P62069 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp46P62069 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp46P62069 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp46P62069 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Usp46P62069 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Usp46P62069 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.27□□□□□ -0.12
Usp46P62069 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp46P62069 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp46P62069 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp46P62069 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Usp46P62069 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Usp46P62069 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp46P62069 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Usp46P62069 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.27□□□□□ -0.12
Usp46P62069 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Usp46P62069 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp46P62069 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp46P62069 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.27□□□□□ -0.12
Usp46P62069 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Usp46P62069 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp46P62069 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp46P62069 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.27□□□□□ -0.13
Usp46P62069 Gm9002-201ENSMUST00000178437 499 ntBASIC14.27□□□□□ -0.13
Usp46P62069 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp46P62069 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.27□□□□□ -0.13
Usp46P62069 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC14.27□□□□□ -0.13
Usp46P62069 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.27□□□□□ -0.13
Usp46P62069 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp46P62069 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp46P62069 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp46P62069 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp46P62069 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp46P62069 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp46P62069 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp46P62069 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp46P62069 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Usp46P62069 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp46P62069 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp46P62069 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp46P62069 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp46P62069 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.27□□□□□ -0.13
Usp46P62069 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp46P62069 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp46P62069 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp46P62069 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms