Protein–RNA interactions for Protein: P59326

Ythdf1, YTH domain-containing family protein 1, mousemouse

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ythdf1P59326 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Ythdf1P59326 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ythdf1P59326 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Ythdf1P59326 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ythdf1P59326 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ythdf1P59326 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ythdf1P59326 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ythdf1P59326 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.05□□□□□ -0.32
Ythdf1P59326 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ythdf1P59326 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ythdf1P59326 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Ythdf1P59326 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.05□□□□□ -0.32
Ythdf1P59326 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ythdf1P59326 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ythdf1P59326 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.05□□□□□ -0.32
Ythdf1P59326 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ythdf1P59326 Gm27300-201ENSMUST00000184085 97 ntBASIC13.05□□□□□ -0.32
Ythdf1P59326 Gm27335-201ENSMUST00000184758 97 ntBASIC13.05□□□□□ -0.32
Ythdf1P59326 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ythdf1P59326 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.05□□□□□ -0.32
Ythdf1P59326 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.05□□□□□ -0.32
Ythdf1P59326 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Ythdf1P59326 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ythdf1P59326 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ythdf1P59326 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ythdf1P59326 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ythdf1P59326 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ythdf1P59326 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ythdf1P59326 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ythdf1P59326 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ythdf1P59326 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ythdf1P59326 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.05□□□□□ -0.32
Ythdf1P59326 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ythdf1P59326 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ythdf1P59326 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ythdf1P59326 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ythdf1P59326 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ythdf1P59326 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ythdf1P59326 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ythdf1P59326 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ythdf1P59326 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.04□□□□□ -0.32
Ythdf1P59326 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.04□□□□□ -0.32
Ythdf1P59326 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ythdf1P59326 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ythdf1P59326 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ythdf1P59326 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.04□□□□□ -0.32
Ythdf1P59326 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.04□□□□□ -0.32
Ythdf1P59326 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ythdf1P59326 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.04□□□□□ -0.32
Ythdf1P59326 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.04□□□□□ -0.32
Ythdf1P59326 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.04□□□□□ -0.32
Ythdf1P59326 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.04□□□□□ -0.32
Ythdf1P59326 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ythdf1P59326 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.04□□□□□ -0.32
Ythdf1P59326 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ythdf1P59326 Gm18027-201ENSMUST00000218947 619 ntBASIC13.04□□□□□ -0.32
Ythdf1P59326 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ythdf1P59326 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ythdf1P59326 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ythdf1P59326 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ythdf1P59326 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ythdf1P59326 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ythdf1P59326 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ythdf1P59326 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ythdf1P59326 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ythdf1P59326 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ythdf1P59326 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ythdf1P59326 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ythdf1P59326 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ythdf1P59326 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.04□□□□□ -0.32
Ythdf1P59326 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ythdf1P59326 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ythdf1P59326 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ythdf1P59326 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ythdf1P59326 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ythdf1P59326 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ythdf1P59326 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ythdf1P59326 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ythdf1P59326 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ythdf1P59326 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ythdf1P59326 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ythdf1P59326 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ythdf1P59326 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
Ythdf1P59326 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ythdf1P59326 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ythdf1P59326 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ythdf1P59326 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ythdf1P59326 Gm7461-201ENSMUST00000058918 827 ntBASIC13.03□□□□□ -0.32
Ythdf1P59326 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ythdf1P59326 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ythdf1P59326 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ythdf1P59326 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.03□□□□□ -0.32
Ythdf1P59326 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ythdf1P59326 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ythdf1P59326 BC001981-202ENSMUST00000191393 1545 ntBASIC13.03□□□□□ -0.32
Ythdf1P59326 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ythdf1P59326 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ythdf1P59326 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ythdf1P59326 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ythdf1P59326 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms