Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks2P56390 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cks2P56390 Mir497b-201ENSMUST00000093601 125 ntBASIC11.34□□□□□ -0.59
Cks2P56390 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks2P56390 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks2P56390 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks2P56390 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Cks2P56390 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks2P56390 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cks2P56390 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cks2P56390 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks2P56390 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cks2P56390 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks2P56390 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cks2P56390 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks2P56390 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cks2P56390 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cks2P56390 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.34□□□□□ -0.59
Cks2P56390 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cks2P56390 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Cks2P56390 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Cks2P56390 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks2P56390 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Cks2P56390 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks2P56390 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.33□□□□□ -0.6
Cks2P56390 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cks2P56390 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks2P56390 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cks2P56390 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks2P56390 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks2P56390 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cks2P56390 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks2P56390 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks2P56390 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cks2P56390 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cks2P56390 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks2P56390 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks2P56390 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cks2P56390 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Cks2P56390 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cks2P56390 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.33□□□□□ -0.6
Cks2P56390 Gm15467-201ENSMUST00000120582 445 ntBASIC11.33□□□□□ -0.6
Cks2P56390 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.33□□□□□ -0.6
Cks2P56390 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.33□□□□□ -0.6
Cks2P56390 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Cks2P56390 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Cks2P56390 Gm18889-201ENSMUST00000174284 929 ntBASIC11.33□□□□□ -0.6
Cks2P56390 Gm27494-201ENSMUST00000184735 189 ntBASIC11.33□□□□□ -0.6
Cks2P56390 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.33□□□□□ -0.6
Cks2P56390 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cks2P56390 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cks2P56390 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.33□□□□□ -0.6
Cks2P56390 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks2P56390 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Cks2P56390 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Cks2P56390 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks2P56390 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks2P56390 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks2P56390 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks2P56390 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cks2P56390 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cks2P56390 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.33□□□□□ -0.6
Cks2P56390 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Cks2P56390 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cks2P56390 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Cks2P56390 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks2P56390 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cks2P56390 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cks2P56390 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks2P56390 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks2P56390 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC11.33□□□□□ -0.6
Cks2P56390 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks2P56390 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cks2P56390 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks2P56390 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Cks2P56390 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks2P56390 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cks2P56390 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks2P56390 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks2P56390 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks2P56390 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Cks2P56390 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks2P56390 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks2P56390 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks2P56390 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks2P56390 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cks2P56390 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks2P56390 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cks2P56390 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks2P56390 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.32□□□□□ -0.6
Cks2P56390 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks2P56390 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks2P56390 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks2P56390 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks2P56390 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cks2P56390 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cks2P56390 Gm25287-201ENSMUST00000103846 110 ntBASIC11.32□□□□□ -0.6
Cks2P56390 Gm22918-201ENSMUST00000103855 110 ntBASIC11.32□□□□□ -0.6
Cks2P56390 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks2P56390 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms