Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NcanP55066 Gm19459-201ENSMUST00000176240 835 ntBASIC14.19□□□□□ -0.14
NcanP55066 Gm25700-201ENSMUST00000177693 110 ntBASIC14.19□□□□□ -0.14
NcanP55066 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.19□□□□□ -0.14
NcanP55066 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.19□□□□□ -0.14
NcanP55066 Gm28693-202ENSMUST00000190758 331 ntBASIC14.19□□□□□ -0.14
NcanP55066 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.19□□□□□ -0.14
NcanP55066 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
NcanP55066 Gm8385-201ENSMUST00000058999 643 ntBASIC14.19□□□□□ -0.14
NcanP55066 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.19□□□□□ -0.14
NcanP55066 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NcanP55066 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NcanP55066 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.19□□□□□ -0.14
NcanP55066 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
NcanP55066 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NcanP55066 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
NcanP55066 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NcanP55066 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
NcanP55066 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NcanP55066 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NcanP55066 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NcanP55066 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NcanP55066 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NcanP55066 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NcanP55066 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NcanP55066 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NcanP55066 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC14.18□□□□□ -0.14
NcanP55066 Gm13665-201ENSMUST00000120830 528 ntBASIC14.18□□□□□ -0.14
NcanP55066 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
NcanP55066 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NcanP55066 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NcanP55066 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC14.18□□□□□ -0.14
NcanP55066 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.18□□□□□ -0.14
NcanP55066 Gm2546-201ENSMUST00000182630 991 ntBASIC14.18□□□□□ -0.14
NcanP55066 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC14.18□□□□□ -0.14
NcanP55066 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.18□□□□□ -0.14
NcanP55066 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.18□□□□□ -0.14
NcanP55066 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NcanP55066 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NcanP55066 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NcanP55066 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.18□□□□□ -0.14
NcanP55066 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.18□□□□□ -0.14
NcanP55066 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NcanP55066 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NcanP55066 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NcanP55066 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NcanP55066 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NcanP55066 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NcanP55066 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NcanP55066 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NcanP55066 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NcanP55066 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NcanP55066 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NcanP55066 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NcanP55066 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
NcanP55066 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NcanP55066 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NcanP55066 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.17□□□□□ -0.14
NcanP55066 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
NcanP55066 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NcanP55066 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
NcanP55066 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
NcanP55066 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NcanP55066 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
NcanP55066 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.17□□□□□ -0.14
NcanP55066 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
NcanP55066 Gm11930-201ENSMUST00000117788 190 ntBASIC14.17□□□□□ -0.14
NcanP55066 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NcanP55066 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
NcanP55066 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.17□□□□□ -0.14
NcanP55066 Gm5778-201ENSMUST00000171003 1072 ntBASIC14.17□□□□□ -0.14
NcanP55066 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NcanP55066 Gm8885-201ENSMUST00000189382 598 ntBASIC14.17□□□□□ -0.14
NcanP55066 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC14.17□□□□□ -0.14
NcanP55066 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NcanP55066 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.17□□□□□ -0.14
NcanP55066 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.17□□□□□ -0.14
NcanP55066 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC14.17□□□□□ -0.14
NcanP55066 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.17□□□□□ -0.14
NcanP55066 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NcanP55066 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
NcanP55066 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NcanP55066 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.17□□□□□ -0.14
NcanP55066 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.17□□□□□ -0.14
NcanP55066 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NcanP55066 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NcanP55066 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NcanP55066 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NcanP55066 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
NcanP55066 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.17□□□□□ -0.14
NcanP55066 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NcanP55066 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NcanP55066 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NcanP55066 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
NcanP55066 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.17□□□□□ -0.14
NcanP55066 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
NcanP55066 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NcanP55066 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NcanP55066 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NcanP55066 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms