Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh6P54276 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Msh6P54276 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
Msh6P54276 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh6P54276 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh6P54276 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh6P54276 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh6P54276 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh6P54276 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh6P54276 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh6P54276 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh6P54276 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh6P54276 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh6P54276 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Msh6P54276 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh6P54276 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh6P54276 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Msh6P54276 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh6P54276 Gm14350-201ENSMUST00000116642 640 ntBASIC17.09■□□□□ 0.33
Msh6P54276 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Msh6P54276 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC17.09■□□□□ 0.33
Msh6P54276 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh6P54276 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Msh6P54276 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC17.09■□□□□ 0.33
Msh6P54276 AC134335.2-201ENSMUST00000227660 440 ntBASIC17.09■□□□□ 0.33
Msh6P54276 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh6P54276 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh6P54276 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Msh6P54276 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Msh6P54276 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh6P54276 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC17.09■□□□□ 0.33
Msh6P54276 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Msh6P54276 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Msh6P54276 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh6P54276 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Msh6P54276 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Msh6P54276 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Msh6P54276 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Msh6P54276 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Msh6P54276 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Msh6P54276 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Msh6P54276 Tmed9-203ENSMUST00000224741 1450 ntBASIC17.08■□□□□ 0.32
Msh6P54276 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh6P54276 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh6P54276 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh6P54276 Gm13123-201ENSMUST00000122173 492 ntBASIC17.08■□□□□ 0.32
Msh6P54276 Gm16379-201ENSMUST00000161469 348 ntBASIC17.08■□□□□ 0.32
Msh6P54276 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Msh6P54276 Gm8762-201ENSMUST00000193486 339 ntBASIC17.08■□□□□ 0.32
Msh6P54276 Gm44064-201ENSMUST00000204964 1087 ntBASIC17.08■□□□□ 0.32
Msh6P54276 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh6P54276 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Msh6P54276 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh6P54276 n-R5s195-201ENSMUST00000082891 119 ntBASIC17.08■□□□□ 0.32
Msh6P54276 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Msh6P54276 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Msh6P54276 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh6P54276 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh6P54276 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC17.08■□□□□ 0.32
Msh6P54276 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Msh6P54276 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Msh6P54276 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Msh6P54276 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Msh6P54276 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC17.08■□□□□ 0.32
Msh6P54276 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh6P54276 Gm18630-201ENSMUST00000222109 1397 ntBASIC17.08■□□□□ 0.32
Msh6P54276 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Msh6P54276 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh6P54276 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Msh6P54276 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Msh6P54276 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Msh6P54276 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh6P54276 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh6P54276 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh6P54276 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh6P54276 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh6P54276 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh6P54276 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC17.07■□□□□ 0.32
Msh6P54276 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC17.07■□□□□ 0.32
Msh6P54276 Gm6222-202ENSMUST00000182143 629 ntBASIC17.07■□□□□ 0.32
Msh6P54276 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Msh6P54276 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh6P54276 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh6P54276 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh6P54276 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh6P54276 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh6P54276 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Msh6P54276 Gm7993-201ENSMUST00000200970 1384 ntBASIC17.07■□□□□ 0.32
Msh6P54276 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh6P54276 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh6P54276 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Msh6P54276 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Msh6P54276 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh6P54276 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC17.07■□□□□ 0.32
Msh6P54276 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh6P54276 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh6P54276 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh6P54276 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Msh6P54276 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh6P54276 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms