Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fdft1P53798 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fdft1P53798 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fdft1P53798 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Fdft1P53798 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Fdft1P53798 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Fdft1P53798 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fdft1P53798 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Fdft1P53798 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fdft1P53798 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fdft1P53798 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.6□□□□□ -0.23
Fdft1P53798 Gm13223-201ENSMUST00000118609 747 ntBASIC13.6□□□□□ -0.23
Fdft1P53798 Gm13453-201ENSMUST00000118708 357 ntBASIC13.6□□□□□ -0.23
Fdft1P53798 Gm15393-201ENSMUST00000120499 219 ntBASIC13.6□□□□□ -0.23
Fdft1P53798 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Fdft1P53798 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Fdft1P53798 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Fdft1P53798 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fdft1P53798 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Fdft1P53798 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fdft1P53798 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fdft1P53798 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Fdft1P53798 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.59□□□□□ -0.23
Fdft1P53798 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Fdft1P53798 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fdft1P53798 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.59□□□□□ -0.23
Fdft1P53798 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fdft1P53798 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fdft1P53798 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fdft1P53798 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.59□□□□□ -0.23
Fdft1P53798 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Fdft1P53798 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fdft1P53798 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fdft1P53798 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.59□□□□□ -0.23
Fdft1P53798 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.59□□□□□ -0.23
Fdft1P53798 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fdft1P53798 Gm3436-201ENSMUST00000179930 840 ntBASIC13.59□□□□□ -0.23
Fdft1P53798 Gm27680-201ENSMUST00000184192 160 ntBASIC13.59□□□□□ -0.23
Fdft1P53798 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.59□□□□□ -0.23
Fdft1P53798 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fdft1P53798 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fdft1P53798 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.59□□□□□ -0.23
Fdft1P53798 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fdft1P53798 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fdft1P53798 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fdft1P53798 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fdft1P53798 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fdft1P53798 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.59□□□□□ -0.23
Fdft1P53798 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Fdft1P53798 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Fdft1P53798 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fdft1P53798 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Fdft1P53798 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Fdft1P53798 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Fdft1P53798 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Fdft1P53798 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fdft1P53798 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fdft1P53798 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fdft1P53798 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.59□□□□□ -0.23
Fdft1P53798 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.59□□□□□ -0.23
Fdft1P53798 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Fdft1P53798 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Fdft1P53798 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Fdft1P53798 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Fdft1P53798 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Fdft1P53798 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.58□□□□□ -0.23
Fdft1P53798 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Fdft1P53798 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
Fdft1P53798 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fdft1P53798 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fdft1P53798 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Fdft1P53798 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fdft1P53798 Rubie-203ENSMUST00000227803 2430 ntBASIC13.58□□□□□ -0.24
Fdft1P53798 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.58□□□□□ -0.24
Fdft1P53798 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Fdft1P53798 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Fdft1P53798 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.58□□□□□ -0.24
Fdft1P53798 Mir6956-201ENSMUST00000183598 62 ntBASIC13.58□□□□□ -0.24
Fdft1P53798 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.58□□□□□ -0.24
Fdft1P53798 Gm43703-201ENSMUST00000200523 763 ntBASIC13.58□□□□□ -0.24
Fdft1P53798 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.58□□□□□ -0.24
Fdft1P53798 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.58□□□□□ -0.24
Fdft1P53798 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fdft1P53798 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.58□□□□□ -0.24
Fdft1P53798 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Fdft1P53798 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fdft1P53798 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fdft1P53798 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fdft1P53798 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fdft1P53798 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.58□□□□□ -0.24
Fdft1P53798 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fdft1P53798 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fdft1P53798 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fdft1P53798 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Fdft1P53798 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fdft1P53798 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fdft1P53798 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.58□□□□□ -0.24
Fdft1P53798 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.58□□□□□ -0.24
Fdft1P53798 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fdft1P53798 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms