Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox3P53784 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.04□□□□□ -0.32
Sox3P53784 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox3P53784 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox3P53784 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox3P53784 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox3P53784 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox3P53784 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.04□□□□□ -0.32
Sox3P53784 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox3P53784 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox3P53784 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox3P53784 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox3P53784 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox3P53784 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox3P53784 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox3P53784 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox3P53784 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox3P53784 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox3P53784 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox3P53784 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.03□□□□□ -0.32
Sox3P53784 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox3P53784 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.03□□□□□ -0.32
Sox3P53784 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.03□□□□□ -0.32
Sox3P53784 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox3P53784 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.03□□□□□ -0.32
Sox3P53784 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Sox3P53784 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox3P53784 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.03□□□□□ -0.32
Sox3P53784 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox3P53784 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.03□□□□□ -0.32
Sox3P53784 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Sox3P53784 Gm15236-201ENSMUST00000117309 379 ntBASIC13.03□□□□□ -0.32
Sox3P53784 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.03□□□□□ -0.32
Sox3P53784 Gm18307-201ENSMUST00000206864 949 ntBASIC13.03□□□□□ -0.32
Sox3P53784 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox3P53784 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Sox3P53784 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Sox3P53784 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Sox3P53784 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox3P53784 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox3P53784 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.03□□□□□ -0.32
Sox3P53784 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox3P53784 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Sox3P53784 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox3P53784 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.03□□□□□ -0.32
Sox3P53784 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox3P53784 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox3P53784 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox3P53784 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox3P53784 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox3P53784 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox3P53784 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Sox3P53784 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox3P53784 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox3P53784 Grk6-205ENSMUST00000224653 2976 ntBASIC13.02□□□□□ -0.32
Sox3P53784 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox3P53784 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox3P53784 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Sox3P53784 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox3P53784 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox3P53784 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox3P53784 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox3P53784 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox3P53784 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox3P53784 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Sox3P53784 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox3P53784 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox3P53784 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.02□□□□□ -0.33
Sox3P53784 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox3P53784 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
Sox3P53784 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox3P53784 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox3P53784 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox3P53784 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sox3P53784 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox3P53784 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sox3P53784 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.02□□□□□ -0.33
Sox3P53784 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.02□□□□□ -0.33
Sox3P53784 Gm45098-201ENSMUST00000207179 657 ntBASIC13.02□□□□□ -0.33
Sox3P53784 Gm7561-201ENSMUST00000211203 886 ntBASIC13.02□□□□□ -0.33
Sox3P53784 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox3P53784 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox3P53784 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Sox3P53784 Mir125a-201ENSMUST00000083545 68 ntBASIC13.02□□□□□ -0.33
Sox3P53784 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.02□□□□□ -0.33
Sox3P53784 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Sox3P53784 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox3P53784 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox3P53784 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.02□□□□□ -0.33
Sox3P53784 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox3P53784 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox3P53784 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox3P53784 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox3P53784 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox3P53784 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox3P53784 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox3P53784 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox3P53784 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox3P53784 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Sox3P53784 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms