Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Pdx1P52946 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
Pdx1P52946 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pdx1P52946 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Pdx1P52946 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdx1P52946 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.44□□□□□ -0.26
Pdx1P52946 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdx1P52946 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pdx1P52946 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdx1P52946 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdx1P52946 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.44□□□□□ -0.26
Pdx1P52946 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.44□□□□□ -0.26
Pdx1P52946 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdx1P52946 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pdx1P52946 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.44□□□□□ -0.26
Pdx1P52946 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pdx1P52946 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pdx1P52946 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdx1P52946 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdx1P52946 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pdx1P52946 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pdx1P52946 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdx1P52946 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.44□□□□□ -0.26
Pdx1P52946 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Pdx1P52946 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdx1P52946 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.44□□□□□ -0.26
Pdx1P52946 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Pdx1P52946 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdx1P52946 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Pdx1P52946 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pdx1P52946 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.43□□□□□ -0.26
Pdx1P52946 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pdx1P52946 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pdx1P52946 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.43□□□□□ -0.26
Pdx1P52946 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdx1P52946 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pdx1P52946 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.43□□□□□ -0.26
Pdx1P52946 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pdx1P52946 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.43□□□□□ -0.26
Pdx1P52946 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pdx1P52946 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pdx1P52946 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdx1P52946 Gm7063-201ENSMUST00000186840 981 ntBASIC13.43□□□□□ -0.26
Pdx1P52946 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdx1P52946 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.43□□□□□ -0.26
Pdx1P52946 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdx1P52946 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdx1P52946 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdx1P52946 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdx1P52946 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdx1P52946 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdx1P52946 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdx1P52946 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdx1P52946 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.43□□□□□ -0.26
Pdx1P52946 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.43□□□□□ -0.26
Pdx1P52946 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdx1P52946 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.43□□□□□ -0.26
Pdx1P52946 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdx1P52946 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdx1P52946 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdx1P52946 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pdx1P52946 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.43□□□□□ -0.26
Pdx1P52946 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdx1P52946 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdx1P52946 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdx1P52946 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdx1P52946 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdx1P52946 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdx1P52946 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdx1P52946 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.42□□□□□ -0.26
Pdx1P52946 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdx1P52946 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdx1P52946 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdx1P52946 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Pdx1P52946 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Pdx1P52946 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdx1P52946 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Pdx1P52946 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdx1P52946 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.42□□□□□ -0.26
Pdx1P52946 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdx1P52946 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdx1P52946 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Pdx1P52946 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.42□□□□□ -0.26
Pdx1P52946 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Pdx1P52946 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdx1P52946 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdx1P52946 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdx1P52946 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdx1P52946 Gm12341-201ENSMUST00000119724 503 ntBASIC13.42□□□□□ -0.26
Pdx1P52946 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdx1P52946 Gm37917-201ENSMUST00000194711 392 ntBASIC13.42□□□□□ -0.26
Pdx1P52946 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdx1P52946 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.42□□□□□ -0.26
Pdx1P52946 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms