Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lhx3P50481 Gm6152-201ENSMUST00000151704 340 ntBASIC13.74□□□□□ -0.21
Lhx3P50481 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lhx3P50481 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.74□□□□□ -0.21
Lhx3P50481 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.74□□□□□ -0.21
Lhx3P50481 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.74□□□□□ -0.21
Lhx3P50481 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Lhx3P50481 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lhx3P50481 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lhx3P50481 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lhx3P50481 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.74□□□□□ -0.21
Lhx3P50481 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lhx3P50481 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lhx3P50481 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.74□□□□□ -0.21
Lhx3P50481 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lhx3P50481 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.74□□□□□ -0.21
Lhx3P50481 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Lhx3P50481 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lhx3P50481 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lhx3P50481 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lhx3P50481 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.74□□□□□ -0.21
Lhx3P50481 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.74□□□□□ -0.21
Lhx3P50481 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Lhx3P50481 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Lhx3P50481 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.73□□□□□ -0.21
Lhx3P50481 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 Gm13612-201ENSMUST00000119276 390 ntBASIC13.73□□□□□ -0.21
Lhx3P50481 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Lhx3P50481 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.73□□□□□ -0.21
Lhx3P50481 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Lhx3P50481 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.73□□□□□ -0.21
Lhx3P50481 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Lhx3P50481 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Lhx3P50481 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.73□□□□□ -0.21
Lhx3P50481 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Lhx3P50481 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.73□□□□□ -0.21
Lhx3P50481 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.73□□□□□ -0.21
Lhx3P50481 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
Lhx3P50481 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lhx3P50481 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.72□□□□□ -0.21
Lhx3P50481 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx3P50481 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx3P50481 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx3P50481 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx3P50481 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.72□□□□□ -0.21
Lhx3P50481 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx3P50481 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx3P50481 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx3P50481 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx3P50481 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx3P50481 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx3P50481 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Lhx3P50481 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx3P50481 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.72□□□□□ -0.21
Lhx3P50481 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx3P50481 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx3P50481 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx3P50481 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.72□□□□□ -0.21
Lhx3P50481 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx3P50481 Itm2b-204ENSMUST00000228637 783 ntBASIC13.72□□□□□ -0.21
Lhx3P50481 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx3P50481 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx3P50481 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx3P50481 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx3P50481 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx3P50481 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx3P50481 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx3P50481 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx3P50481 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lhx3P50481 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms