Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Gm9385-201ENSMUST00000117563 472 ntBASIC11.25□□□□□ -0.61
Nkx2-1P50220 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Mir3113-201ENSMUST00000175478 76 ntBASIC11.25□□□□□ -0.61
Nkx2-1P50220 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Gm6443-201ENSMUST00000203599 874 ntBASIC11.25□□□□□ -0.61
Nkx2-1P50220 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.25□□□□□ -0.61
Nkx2-1P50220 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.25□□□□□ -0.61
Nkx2-1P50220 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-1P50220 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Gm17271-201ENSMUST00000165535 355 ntBASIC11.24□□□□□ -0.61
Nkx2-1P50220 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.24□□□□□ -0.61
Nkx2-1P50220 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.24□□□□□ -0.61
Nkx2-1P50220 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.24□□□□□ -0.61
Nkx2-1P50220 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-1P50220 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-1P50220 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.24□□□□□ -0.61
Nkx2-1P50220 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.23□□□□□ -0.61
Nkx2-1P50220 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms