Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.32□□□□□ -0.6
Abca1P41233 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Gm15429-201ENSMUST00000151268 798 ntBASIC11.32□□□□□ -0.6
Abca1P41233 Gm8652-201ENSMUST00000181363 964 ntBASIC11.32□□□□□ -0.6
Abca1P41233 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.32□□□□□ -0.6
Abca1P41233 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.32□□□□□ -0.6
Abca1P41233 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.32□□□□□ -0.6
Abca1P41233 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Abca1P41233 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.32□□□□□ -0.6
Abca1P41233 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abca1P41233 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.31□□□□□ -0.6
Abca1P41233 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Abca1P41233 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Abca1P41233 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abca1P41233 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abca1P41233 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abca1P41233 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abca1P41233 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abca1P41233 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abca1P41233 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abca1P41233 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abca1P41233 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abca1P41233 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abca1P41233 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abca1P41233 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abca1P41233 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.31□□□□□ -0.6
Abca1P41233 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abca1P41233 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Abca1P41233 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.31□□□□□ -0.6
Abca1P41233 Gm5187-201ENSMUST00000117317 991 ntBASIC11.31□□□□□ -0.6
Abca1P41233 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.31□□□□□ -0.6
Abca1P41233 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.31□□□□□ -0.6
Abca1P41233 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Abca1P41233 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Abca1P41233 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Abca1P41233 Gm38241-201ENSMUST00000192641 898 ntBASIC11.31□□□□□ -0.6
Abca1P41233 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abca1P41233 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Abca1P41233 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Abca1P41233 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abca1P41233 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Abca1P41233 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.31□□□□□ -0.6
Abca1P41233 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abca1P41233 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Abca1P41233 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abca1P41233 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abca1P41233 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.31□□□□□ -0.6
Abca1P41233 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Abca1P41233 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abca1P41233 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abca1P41233 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Abca1P41233 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abca1P41233 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Abca1P41233 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abca1P41233 Gm22018-201ENSMUST00000104357 131 ntBASIC11.3□□□□□ -0.6
Abca1P41233 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.3□□□□□ -0.6
Abca1P41233 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.3□□□□□ -0.6
Abca1P41233 Gm15957-201ENSMUST00000118893 974 ntBASIC11.3□□□□□ -0.6
Abca1P41233 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Abca1P41233 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.3□□□□□ -0.6
Abca1P41233 Gm7399-201ENSMUST00000032395 858 ntBASIC11.3□□□□□ -0.6
Abca1P41233 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.3□□□□□ -0.6
Abca1P41233 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.3□□□□□ -0.6
Abca1P41233 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Abca1P41233 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Abca1P41233 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abca1P41233 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abca1P41233 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abca1P41233 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abca1P41233 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abca1P41233 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.3□□□□□ -0.6
Abca1P41233 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.3□□□□□ -0.6
Abca1P41233 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Abca1P41233 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abca1P41233 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Abca1P41233 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abca1P41233 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abca1P41233 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Abca1P41233 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.3□□□□□ -0.6
Abca1P41233 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.3□□□□□ -0.6
Abca1P41233 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.3□□□□□ -0.6
Abca1P41233 Gm43179-201ENSMUST00000198797 275 ntBASIC11.3□□□□□ -0.6
Abca1P41233 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.3□□□□□ -0.6
Abca1P41233 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.3□□□□□ -0.6
Abca1P41233 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Abca1P41233 Gm6091-201ENSMUST00000098307 165 ntBASIC11.3□□□□□ -0.6
Abca1P41233 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abca1P41233 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abca1P41233 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Abca1P41233 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.3□□□□□ -0.6
Abca1P41233 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abca1P41233 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abca1P41233 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abca1P41233 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abca1P41233 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.3□□□□□ -0.6
Abca1P41233 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Abca1P41233 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms