Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Fen1P39749 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.68□□□□□ -0.22
Fen1P39749 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fen1P39749 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fen1P39749 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fen1P39749 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fen1P39749 Gm10175-201ENSMUST00000086013 645 ntBASIC13.68□□□□□ -0.22
Fen1P39749 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fen1P39749 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Fen1P39749 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fen1P39749 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fen1P39749 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fen1P39749 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fen1P39749 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fen1P39749 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Fen1P39749 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fen1P39749 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Fen1P39749 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fen1P39749 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Fen1P39749 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Fen1P39749 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Fen1P39749 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Fen1P39749 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fen1P39749 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Fen1P39749 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fen1P39749 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fen1P39749 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fen1P39749 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Fen1P39749 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.67□□□□□ -0.22
Fen1P39749 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.67□□□□□ -0.22
Fen1P39749 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.67□□□□□ -0.22
Fen1P39749 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.67□□□□□ -0.22
Fen1P39749 Gm44608-201ENSMUST00000206827 855 ntBASIC13.67□□□□□ -0.22
Fen1P39749 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.67□□□□□ -0.22
Fen1P39749 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Fen1P39749 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fen1P39749 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Fen1P39749 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Fen1P39749 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.67□□□□□ -0.22
Fen1P39749 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Fen1P39749 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Fen1P39749 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fen1P39749 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Fen1P39749 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.67□□□□□ -0.22
Fen1P39749 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fen1P39749 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fen1P39749 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Fen1P39749 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Fen1P39749 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fen1P39749 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fen1P39749 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Fen1P39749 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fen1P39749 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fen1P39749 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Fen1P39749 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Fen1P39749 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fen1P39749 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fen1P39749 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.66□□□□□ -0.22
Fen1P39749 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.66□□□□□ -0.22
Fen1P39749 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fen1P39749 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.66□□□□□ -0.22
Fen1P39749 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fen1P39749 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fen1P39749 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fen1P39749 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fen1P39749 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.66□□□□□ -0.22
Fen1P39749 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Fen1P39749 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fen1P39749 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fen1P39749 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fen1P39749 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fen1P39749 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Fen1P39749 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Fen1P39749 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Fen1P39749 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fen1P39749 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fen1P39749 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fen1P39749 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fen1P39749 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fen1P39749 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fen1P39749 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Fen1P39749 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fen1P39749 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fen1P39749 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Fen1P39749 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fen1P39749 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fen1P39749 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fen1P39749 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Fen1P39749 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Fen1P39749 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.65□□□□□ -0.22
Fen1P39749 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Fen1P39749 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.65□□□□□ -0.22
Fen1P39749 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fen1P39749 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fen1P39749 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.65□□□□□ -0.22
Fen1P39749 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.65□□□□□ -0.22
Fen1P39749 Gm20553-201ENSMUST00000204205 844 ntBASIC13.65□□□□□ -0.22
Fen1P39749 Gm18041-201ENSMUST00000218210 618 ntBASIC13.65□□□□□ -0.22
Fen1P39749 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fen1P39749 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms