Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LdlrP35951 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LdlrP35951 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LdlrP35951 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LdlrP35951 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LdlrP35951 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LdlrP35951 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LdlrP35951 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LdlrP35951 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LdlrP35951 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LdlrP35951 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
LdlrP35951 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.55□□□□□ -0.24
LdlrP35951 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
LdlrP35951 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
LdlrP35951 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LdlrP35951 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
LdlrP35951 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LdlrP35951 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LdlrP35951 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LdlrP35951 Gm27680-201ENSMUST00000184192 160 ntBASIC13.55□□□□□ -0.24
LdlrP35951 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.55□□□□□ -0.24
LdlrP35951 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.55□□□□□ -0.24
LdlrP35951 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.55□□□□□ -0.24
LdlrP35951 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.55□□□□□ -0.24
LdlrP35951 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
LdlrP35951 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LdlrP35951 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LdlrP35951 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LdlrP35951 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LdlrP35951 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LdlrP35951 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LdlrP35951 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.55□□□□□ -0.24
LdlrP35951 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.55□□□□□ -0.24
LdlrP35951 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LdlrP35951 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
LdlrP35951 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LdlrP35951 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
LdlrP35951 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LdlrP35951 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.55□□□□□ -0.24
LdlrP35951 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LdlrP35951 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LdlrP35951 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LdlrP35951 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
LdlrP35951 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LdlrP35951 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.54□□□□□ -0.24
LdlrP35951 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LdlrP35951 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LdlrP35951 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
LdlrP35951 Gm14127-201ENSMUST00000117906 678 ntBASIC13.54□□□□□ -0.24
LdlrP35951 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LdlrP35951 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LdlrP35951 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LdlrP35951 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LdlrP35951 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.54□□□□□ -0.24
LdlrP35951 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
LdlrP35951 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LdlrP35951 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LdlrP35951 Gm7653-201ENSMUST00000214567 508 ntBASIC13.54□□□□□ -0.24
LdlrP35951 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.54□□□□□ -0.24
LdlrP35951 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
LdlrP35951 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LdlrP35951 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LdlrP35951 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
LdlrP35951 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LdlrP35951 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.54□□□□□ -0.24
LdlrP35951 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
LdlrP35951 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LdlrP35951 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LdlrP35951 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LdlrP35951 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LdlrP35951 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LdlrP35951 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
LdlrP35951 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LdlrP35951 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LdlrP35951 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LdlrP35951 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LdlrP35951 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LdlrP35951 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LdlrP35951 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LdlrP35951 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LdlrP35951 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
LdlrP35951 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
LdlrP35951 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LdlrP35951 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LdlrP35951 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LdlrP35951 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LdlrP35951 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LdlrP35951 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LdlrP35951 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LdlrP35951 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
LdlrP35951 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LdlrP35951 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LdlrP35951 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.53□□□□□ -0.24
LdlrP35951 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LdlrP35951 Gm15487-201ENSMUST00000122373 465 ntBASIC13.53□□□□□ -0.24
LdlrP35951 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LdlrP35951 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LdlrP35951 Gm45453-201ENSMUST00000211758 853 ntBASIC13.53□□□□□ -0.24
LdlrP35951 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LdlrP35951 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms