Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc1P35601 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc1P35601 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc1P35601 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc1P35601 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.32□□□□□ -0.12
Rfc1P35601 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.32□□□□□ -0.12
Rfc1P35601 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc1P35601 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rfc1P35601 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc1P35601 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc1P35601 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.32□□□□□ -0.12
Rfc1P35601 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc1P35601 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rfc1P35601 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfc1P35601 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfc1P35601 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfc1P35601 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfc1P35601 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfc1P35601 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.31□□□□□ -0.12
Rfc1P35601 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfc1P35601 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfc1P35601 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rfc1P35601 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfc1P35601 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rfc1P35601 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfc1P35601 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rfc1P35601 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfc1P35601 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rfc1P35601 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.31□□□□□ -0.12
Rfc1P35601 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Rfc1P35601 Gm10275-202ENSMUST00000168697 495 ntBASIC14.31□□□□□ -0.12
Rfc1P35601 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.31□□□□□ -0.12
Rfc1P35601 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rfc1P35601 Gm18206-201ENSMUST00000207027 926 ntBASIC14.31□□□□□ -0.12
Rfc1P35601 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rfc1P35601 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.31□□□□□ -0.12
Rfc1P35601 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfc1P35601 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfc1P35601 Gm10275-201ENSMUST00000092620 635 ntBASIC14.31□□□□□ -0.12
Rfc1P35601 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfc1P35601 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfc1P35601 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rfc1P35601 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfc1P35601 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfc1P35601 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfc1P35601 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.31□□□□□ -0.12
Rfc1P35601 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfc1P35601 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfc1P35601 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC14.3□□□□□ -0.12
Rfc1P35601 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfc1P35601 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfc1P35601 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rfc1P35601 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.3□□□□□ -0.12
Rfc1P35601 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfc1P35601 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfc1P35601 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfc1P35601 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfc1P35601 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rfc1P35601 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.3□□□□□ -0.12
Rfc1P35601 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Rfc1P35601 Gm12260-201ENSMUST00000122447 411 ntBASIC14.3□□□□□ -0.12
Rfc1P35601 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
Rfc1P35601 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfc1P35601 Gm44492-201ENSMUST00000197012 141 ntBASIC14.3□□□□□ -0.12
Rfc1P35601 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfc1P35601 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfc1P35601 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfc1P35601 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Rfc1P35601 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Rfc1P35601 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfc1P35601 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfc1P35601 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfc1P35601 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfc1P35601 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Rfc1P35601 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.3□□□□□ -0.12
Rfc1P35601 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfc1P35601 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfc1P35601 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rfc1P35601 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfc1P35601 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfc1P35601 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.29□□□□□ -0.12
Rfc1P35601 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfc1P35601 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.29□□□□□ -0.12
Rfc1P35601 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rfc1P35601 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rfc1P35601 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfc1P35601 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.29□□□□□ -0.12
Rfc1P35601 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.29□□□□□ -0.12
Rfc1P35601 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Rfc1P35601 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Rfc1P35601 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Rfc1P35601 Mir8117-201ENSMUST00000184773 107 ntBASIC14.29□□□□□ -0.12
Rfc1P35601 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rfc1P35601 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.29□□□□□ -0.12
Rfc1P35601 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfc1P35601 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.29□□□□□ -0.12
Rfc1P35601 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfc1P35601 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rfc1P35601 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfc1P35601 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms