Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
Mmp13P33435 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp13P33435 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Mmp13P33435 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp13P33435 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.93□□□□□ -0.18
Mmp13P33435 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp13P33435 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp13P33435 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp13P33435 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp13P33435 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Mmp13P33435 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp13P33435 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.93□□□□□ -0.18
Mmp13P33435 Gm15653-201ENSMUST00000119247 907 ntBASIC13.93□□□□□ -0.18
Mmp13P33435 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp13P33435 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp13P33435 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp13P33435 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp13P33435 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp13P33435 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp13P33435 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Mmp13P33435 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp13P33435 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp13P33435 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp13P33435 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp13P33435 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Mmp13P33435 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Mmp13P33435 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp13P33435 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp13P33435 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp13P33435 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.93□□□□□ -0.18
Mmp13P33435 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp13P33435 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp13P33435 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
Mmp13P33435 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mmp13P33435 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp13P33435 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp13P33435 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp13P33435 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Mmp13P33435 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp13P33435 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp13P33435 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp13P33435 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp13P33435 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp13P33435 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp13P33435 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp13P33435 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.92□□□□□ -0.18
Mmp13P33435 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.92□□□□□ -0.18
Mmp13P33435 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp13P33435 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp13P33435 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Mmp13P33435 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp13P33435 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp13P33435 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.92□□□□□ -0.18
Mmp13P33435 Gm27306-201ENSMUST00000183970 107 ntBASIC13.92□□□□□ -0.18
Mmp13P33435 Gm27680-201ENSMUST00000184192 160 ntBASIC13.92□□□□□ -0.18
Mmp13P33435 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.92□□□□□ -0.18
Mmp13P33435 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Mmp13P33435 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.92□□□□□ -0.18
Mmp13P33435 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp13P33435 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp13P33435 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp13P33435 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.92□□□□□ -0.18
Mmp13P33435 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Mmp13P33435 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp13P33435 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp13P33435 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mmp13P33435 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Mmp13P33435 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Mmp13P33435 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Mmp13P33435 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Mmp13P33435 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Mmp13P33435 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.91□□□□□ -0.18
Mmp13P33435 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Mmp13P33435 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Mmp13P33435 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Mmp13P33435 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Mmp13P33435 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Mmp13P33435 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Mmp13P33435 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Mmp13P33435 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Mmp13P33435 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.91□□□□□ -0.18
Mmp13P33435 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.91□□□□□ -0.18
Mmp13P33435 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Mmp13P33435 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Mmp13P33435 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.91□□□□□ -0.18
Mmp13P33435 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Mmp13P33435 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Mmp13P33435 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Mmp13P33435 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.91□□□□□ -0.18
Mmp13P33435 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.91□□□□□ -0.18
Mmp13P33435 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.91□□□□□ -0.18
Mmp13P33435 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.91□□□□□ -0.18
Mmp13P33435 Mir7684-201ENSMUST00000183858 60 ntBASIC13.91□□□□□ -0.18
Mmp13P33435 Gm37714-201ENSMUST00000194742 342 ntBASIC13.91□□□□□ -0.18
Mmp13P33435 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Mmp13P33435 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.91□□□□□ -0.18
Mmp13P33435 Gm9063-201ENSMUST00000223299 582 ntBASIC13.91□□□□□ -0.18
Mmp13P33435 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.91□□□□□ -0.18
Mmp13P33435 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Mmp13P33435 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms