Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vcam1P29533 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vcam1P29533 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vcam1P29533 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vcam1P29533 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vcam1P29533 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vcam1P29533 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vcam1P29533 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vcam1P29533 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Vcam1P29533 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Vcam1P29533 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.53■□□□□ 0.08
Vcam1P29533 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vcam1P29533 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vcam1P29533 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Vcam1P29533 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Vcam1P29533 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Vcam1P29533 Gm11793-201ENSMUST00000120433 981 ntBASIC15.53■□□□□ 0.08
Vcam1P29533 Gm16479-201ENSMUST00000121706 932 ntBASIC15.53■□□□□ 0.08
Vcam1P29533 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vcam1P29533 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.53■□□□□ 0.08
Vcam1P29533 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC15.53■□□□□ 0.08
Vcam1P29533 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vcam1P29533 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC15.53■□□□□ 0.08
Vcam1P29533 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vcam1P29533 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Vcam1P29533 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vcam1P29533 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vcam1P29533 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Vcam1P29533 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Vcam1P29533 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vcam1P29533 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vcam1P29533 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vcam1P29533 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vcam1P29533 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vcam1P29533 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vcam1P29533 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vcam1P29533 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vcam1P29533 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vcam1P29533 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vcam1P29533 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vcam1P29533 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Vcam1P29533 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vcam1P29533 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vcam1P29533 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vcam1P29533 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vcam1P29533 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vcam1P29533 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vcam1P29533 Gm14723-201ENSMUST00000118686 215 ntBASIC15.52■□□□□ 0.08
Vcam1P29533 Gm2231-201ENSMUST00000125661 612 ntBASIC15.52■□□□□ 0.08
Vcam1P29533 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.52■□□□□ 0.08
Vcam1P29533 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC15.52■□□□□ 0.08
Vcam1P29533 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC15.52■□□□□ 0.08
Vcam1P29533 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vcam1P29533 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vcam1P29533 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.52■□□□□ 0.08
Vcam1P29533 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC15.52■□□□□ 0.08
Vcam1P29533 Gm27516-201ENSMUST00000184237 98 ntBASIC15.52■□□□□ 0.08
Vcam1P29533 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vcam1P29533 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vcam1P29533 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC15.52■□□□□ 0.08
Vcam1P29533 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Vcam1P29533 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vcam1P29533 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vcam1P29533 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Vcam1P29533 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Vcam1P29533 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.52■□□□□ 0.07
Vcam1P29533 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Vcam1P29533 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vcam1P29533 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vcam1P29533 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vcam1P29533 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.51■□□□□ 0.07
Vcam1P29533 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vcam1P29533 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vcam1P29533 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Vcam1P29533 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vcam1P29533 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vcam1P29533 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vcam1P29533 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vcam1P29533 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vcam1P29533 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Vcam1P29533 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vcam1P29533 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vcam1P29533 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vcam1P29533 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.51■□□□□ 0.07
Vcam1P29533 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC15.51■□□□□ 0.07
Vcam1P29533 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC15.51■□□□□ 0.07
Vcam1P29533 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.51■□□□□ 0.07
Vcam1P29533 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC15.51■□□□□ 0.07
Vcam1P29533 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC15.51■□□□□ 0.07
Vcam1P29533 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.51■□□□□ 0.07
Vcam1P29533 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vcam1P29533 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vcam1P29533 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vcam1P29533 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vcam1P29533 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vcam1P29533 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vcam1P29533 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Vcam1P29533 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Vcam1P29533 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vcam1P29533 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms