Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pde6bP23440 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pde6bP23440 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pde6bP23440 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pde6bP23440 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pde6bP23440 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pde6bP23440 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pde6bP23440 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pde6bP23440 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Pde6bP23440 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pde6bP23440 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Pde6bP23440 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pde6bP23440 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.84□□□□□ -0.03
Pde6bP23440 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pde6bP23440 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pde6bP23440 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pde6bP23440 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Pde6bP23440 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pde6bP23440 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.84□□□□□ -0.03
Pde6bP23440 Gm29649-201ENSMUST00000185649 419 ntBASIC14.84□□□□□ -0.03
Pde6bP23440 Gm38671-201ENSMUST00000200573 130 ntBASIC14.84□□□□□ -0.03
Pde6bP23440 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.84□□□□□ -0.03
Pde6bP23440 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.84□□□□□ -0.03
Pde6bP23440 Gm7561-201ENSMUST00000211203 886 ntBASIC14.84□□□□□ -0.03
Pde6bP23440 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.84□□□□□ -0.03
Pde6bP23440 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.84□□□□□ -0.03
Pde6bP23440 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pde6bP23440 Gm6091-201ENSMUST00000098307 165 ntBASIC14.84□□□□□ -0.03
Pde6bP23440 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pde6bP23440 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.84□□□□□ -0.03
Pde6bP23440 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pde6bP23440 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pde6bP23440 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pde6bP23440 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Pde6bP23440 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pde6bP23440 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pde6bP23440 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pde6bP23440 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pde6bP23440 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pde6bP23440 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pde6bP23440 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pde6bP23440 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pde6bP23440 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Pde6bP23440 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pde6bP23440 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.83□□□□□ -0.04
Pde6bP23440 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pde6bP23440 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pde6bP23440 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Pde6bP23440 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
Pde6bP23440 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.83□□□□□ -0.04
Pde6bP23440 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pde6bP23440 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pde6bP23440 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.83□□□□□ -0.04
Pde6bP23440 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pde6bP23440 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.83□□□□□ -0.04
Pde6bP23440 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.83□□□□□ -0.04
Pde6bP23440 Gm44397-201ENSMUST00000195950 113 ntBASIC14.83□□□□□ -0.04
Pde6bP23440 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.83□□□□□ -0.04
Pde6bP23440 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pde6bP23440 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.83□□□□□ -0.04
Pde6bP23440 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.83□□□□□ -0.04
Pde6bP23440 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pde6bP23440 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Pde6bP23440 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pde6bP23440 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pde6bP23440 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.83□□□□□ -0.04
Pde6bP23440 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pde6bP23440 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pde6bP23440 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pde6bP23440 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pde6bP23440 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pde6bP23440 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pde6bP23440 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Pde6bP23440 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pde6bP23440 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pde6bP23440 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pde6bP23440 Rubie-203ENSMUST00000227803 2430 ntBASIC14.83□□□□□ -0.04
Pde6bP23440 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.83□□□□□ -0.04
Pde6bP23440 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Pde6bP23440 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pde6bP23440 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pde6bP23440 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6bP23440 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6bP23440 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Pde6bP23440 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.82□□□□□ -0.04
Pde6bP23440 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6bP23440 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pde6bP23440 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6bP23440 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6bP23440 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6bP23440 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6bP23440 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6bP23440 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.82□□□□□ -0.04
Pde6bP23440 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6bP23440 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6bP23440 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6bP23440 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.82□□□□□ -0.04
Pde6bP23440 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6bP23440 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pde6bP23440 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms