Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cntn1P12960 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cntn1P12960 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cntn1P12960 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cntn1P12960 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cntn1P12960 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cntn1P12960 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cntn1P12960 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cntn1P12960 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cntn1P12960 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cntn1P12960 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cntn1P12960 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cntn1P12960 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cntn1P12960 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.03□□□□□ -0.32
Cntn1P12960 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.03□□□□□ -0.32
Cntn1P12960 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cntn1P12960 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.03□□□□□ -0.32
Cntn1P12960 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cntn1P12960 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.03□□□□□ -0.32
Cntn1P12960 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cntn1P12960 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cntn1P12960 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.03□□□□□ -0.32
Cntn1P12960 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cntn1P12960 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cntn1P12960 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.03□□□□□ -0.32
Cntn1P12960 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cntn1P12960 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.03□□□□□ -0.32
Cntn1P12960 Gm27892-201ENSMUST00000185017 106 ntBASIC13.03□□□□□ -0.32
Cntn1P12960 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cntn1P12960 Gm5161-201ENSMUST00000075243 853 ntBASIC13.03□□□□□ -0.32
Cntn1P12960 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cntn1P12960 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cntn1P12960 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cntn1P12960 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cntn1P12960 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cntn1P12960 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cntn1P12960 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cntn1P12960 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cntn1P12960 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cntn1P12960 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cntn1P12960 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
Cntn1P12960 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cntn1P12960 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cntn1P12960 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Cntn1P12960 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cntn1P12960 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Cntn1P12960 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cntn1P12960 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cntn1P12960 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Cntn1P12960 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Cntn1P12960 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cntn1P12960 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cntn1P12960 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cntn1P12960 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cntn1P12960 Gm15770-201ENSMUST00000117498 584 ntBASIC13.02□□□□□ -0.33
Cntn1P12960 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.02□□□□□ -0.33
Cntn1P12960 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.02□□□□□ -0.33
Cntn1P12960 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.02□□□□□ -0.33
Cntn1P12960 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cntn1P12960 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.02□□□□□ -0.33
Cntn1P12960 Gm43433-201ENSMUST00000196573 481 ntBASIC13.02□□□□□ -0.33
Cntn1P12960 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Cntn1P12960 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cntn1P12960 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.02□□□□□ -0.33
Cntn1P12960 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cntn1P12960 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cntn1P12960 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.02□□□□□ -0.33
Cntn1P12960 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Cntn1P12960 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cntn1P12960 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cntn1P12960 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.02□□□□□ -0.33
Cntn1P12960 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.02□□□□□ -0.33
Cntn1P12960 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cntn1P12960 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cntn1P12960 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cntn1P12960 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cntn1P12960 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.02□□□□□ -0.33
Cntn1P12960 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cntn1P12960 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.02□□□□□ -0.33
Cntn1P12960 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cntn1P12960 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Cntn1P12960 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cntn1P12960 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cntn1P12960 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cntn1P12960 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cntn1P12960 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cntn1P12960 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cntn1P12960 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cntn1P12960 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cntn1P12960 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cntn1P12960 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cntn1P12960 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cntn1P12960 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cntn1P12960 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cntn1P12960 Gm12928-201ENSMUST00000117115 573 ntBASIC13.01□□□□□ -0.33
Cntn1P12960 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.01□□□□□ -0.33
Cntn1P12960 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cntn1P12960 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cntn1P12960 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.01□□□□□ -0.33
Cntn1P12960 Gm6244-201ENSMUST00000178732 841 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms