Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC17.49■□□□□ 0.39
Hoxc9P09633 Gm5637-201ENSMUST00000153890 1119 ntBASIC17.49■□□□□ 0.39
Hoxc9P09633 Gm26083-201ENSMUST00000157904 193 ntBASIC17.49■□□□□ 0.39
Hoxc9P09633 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Hoxc9P09633 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc9P09633 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC17.49■□□□□ 0.39
Hoxc9P09633 Gm7118-201ENSMUST00000200167 1003 ntBASIC17.49■□□□□ 0.39
Hoxc9P09633 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc9P09633 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC17.49■□□□□ 0.39
Hoxc9P09633 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc9P09633 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Hoxc9P09633 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC17.49■□□□□ 0.39
Hoxc9P09633 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc9P09633 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hoxc9P09633 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hoxc9P09633 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Hoxc9P09633 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hoxc9P09633 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hoxc9P09633 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hoxc9P09633 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hoxc9P09633 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hoxc9P09633 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hoxc9P09633 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Hoxc9P09633 Gm11978-201ENSMUST00000122315 466 ntBASIC17.48■□□□□ 0.39
Hoxc9P09633 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hoxc9P09633 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC17.48■□□□□ 0.39
Hoxc9P09633 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC17.48■□□□□ 0.39
Hoxc9P09633 AC132384.14-201ENSMUST00000219346 1147 ntBASIC17.48■□□□□ 0.39
Hoxc9P09633 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hoxc9P09633 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Hoxc9P09633 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hoxc9P09633 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hoxc9P09633 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC17.48■□□□□ 0.39
Hoxc9P09633 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hoxc9P09633 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hoxc9P09633 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc9P09633 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc9P09633 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc9P09633 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc9P09633 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc9P09633 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc9P09633 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc9P09633 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc9P09633 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc9P09633 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc9P09633 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc9P09633 Gm24255-201ENSMUST00000104481 128 ntBASIC17.47■□□□□ 0.39
Hoxc9P09633 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc9P09633 Gm15808-201ENSMUST00000119046 604 ntBASIC17.47■□□□□ 0.39
Hoxc9P09633 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC17.47■□□□□ 0.39
Hoxc9P09633 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc9P09633 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC17.47■□□□□ 0.39
Hoxc9P09633 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC17.47■□□□□ 0.39
Hoxc9P09633 Gm4768-201ENSMUST00000206199 686 ntBASIC17.47■□□□□ 0.39
Hoxc9P09633 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc9P09633 AC159747.1-201ENSMUST00000219903 265 ntBASIC17.47■□□□□ 0.39
Hoxc9P09633 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Hoxc9P09633 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
Hoxc9P09633 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc9P09633 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc9P09633 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc9P09633 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.47■□□□□ 0.39
Hoxc9P09633 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Hoxc9P09633 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Hoxc9P09633 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc9P09633 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Hoxc9P09633 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc9P09633 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc9P09633 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc9P09633 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc9P09633 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc9P09633 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc9P09633 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc9P09633 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc9P09633 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc9P09633 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Hoxc9P09633 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc9P09633 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc9P09633 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc9P09633 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC17.46■□□□□ 0.39
Hoxc9P09633 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Hoxc9P09633 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC17.46■□□□□ 0.39
Hoxc9P09633 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC17.46■□□□□ 0.39
Hoxc9P09633 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc9P09633 Gm26185-201ENSMUST00000157692 266 ntBASIC17.46■□□□□ 0.39
Hoxc9P09633 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC17.46■□□□□ 0.39
Hoxc9P09633 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc9P09633 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC17.46■□□□□ 0.39
Hoxc9P09633 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Hoxc9P09633 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc9P09633 Gm43273-201ENSMUST00000199649 2594 ntBASIC17.46■□□□□ 0.39
Hoxc9P09633 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC17.46■□□□□ 0.39
Hoxc9P09633 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc9P09633 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Hoxc9P09633 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Hoxc9P09633 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Hoxc9P09633 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxc9P09633 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.45■□□□□ 0.38
Hoxc9P09633 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxc9P09633 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms