Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Col4a2P08122 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a2P08122 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a2P08122 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a2P08122 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a2P08122 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a2P08122 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a2P08122 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Col4a2P08122 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a2P08122 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Col4a2P08122 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.43
Col4a2P08122 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.4□□□□□ -0.43
Col4a2P08122 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col4a2P08122 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col4a2P08122 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.4□□□□□ -0.43
Col4a2P08122 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
Col4a2P08122 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.4□□□□□ -0.43
Col4a2P08122 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col4a2P08122 Gm18584-201ENSMUST00000203098 964 ntBASIC12.4□□□□□ -0.43
Col4a2P08122 Gm19163-201ENSMUST00000223313 780 ntBASIC12.4□□□□□ -0.43
Col4a2P08122 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Col4a2P08122 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a2P08122 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.39□□□□□ -0.43
Col4a2P08122 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a2P08122 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a2P08122 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a2P08122 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a2P08122 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Col4a2P08122 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a2P08122 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a2P08122 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Col4a2P08122 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a2P08122 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a2P08122 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a2P08122 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a2P08122 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a2P08122 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a2P08122 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.39□□□□□ -0.43
Col4a2P08122 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.39□□□□□ -0.43
Col4a2P08122 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.39□□□□□ -0.43
Col4a2P08122 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.39□□□□□ -0.43
Col4a2P08122 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a2P08122 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a2P08122 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a2P08122 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a2P08122 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a2P08122 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a2P08122 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Col4a2P08122 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a2P08122 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a2P08122 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a2P08122 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a2P08122 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a2P08122 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.38□□□□□ -0.43
Col4a2P08122 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a2P08122 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a2P08122 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a2P08122 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Col4a2P08122 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a2P08122 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.38□□□□□ -0.43
Col4a2P08122 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a2P08122 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Col4a2P08122 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a2P08122 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.38□□□□□ -0.43
Col4a2P08122 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a2P08122 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.38□□□□□ -0.43
Col4a2P08122 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a2P08122 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a2P08122 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.38□□□□□ -0.43
Col4a2P08122 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Col4a2P08122 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Col4a2P08122 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a2P08122 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a2P08122 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.38□□□□□ -0.43
Col4a2P08122 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Col4a2P08122 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a2P08122 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a2P08122 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a2P08122 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a2P08122 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a2P08122 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.38□□□□□ -0.43
Col4a2P08122 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a2P08122 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.37□□□□□ -0.43
Col4a2P08122 Gm10434-201ENSMUST00000101158 471 ntBASIC12.37□□□□□ -0.43
Col4a2P08122 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.37□□□□□ -0.43
Col4a2P08122 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.37□□□□□ -0.43
Col4a2P08122 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.37□□□□□ -0.43
Col4a2P08122 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.37□□□□□ -0.43
Col4a2P08122 Gm18041-201ENSMUST00000218210 618 ntBASIC12.37□□□□□ -0.43
Col4a2P08122 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Col4a2P08122 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a2P08122 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms