Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
P04224 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P04224 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P04224 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P04224 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
P04224 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.93□□□□□ -0.5
P04224 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
P04224 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P04224 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P04224 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
P04224 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P04224 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
P04224 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P04224 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.93□□□□□ -0.5
P04224 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.93□□□□□ -0.5
P04224 Gm27301-201ENSMUST00000184012 127 ntBASIC11.93□□□□□ -0.5
P04224 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
P04224 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P04224 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P04224 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
P04224 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC11.93□□□□□ -0.5
P04224 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC11.93□□□□□ -0.5
P04224 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.93□□□□□ -0.5
P04224 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P04224 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
P04224 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
P04224 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
P04224 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P04224 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P04224 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P04224 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.93□□□□□ -0.5
P04224 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
P04224 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.93□□□□□ -0.5
P04224 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P04224 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P04224 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P04224 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04224 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04224 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
P04224 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04224 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
P04224 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04224 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P04224 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04224 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.92□□□□□ -0.5
P04224 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04224 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04224 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04224 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04224 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.92□□□□□ -0.5
P04224 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04224 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P04224 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P04224 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
P04224 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.92□□□□□ -0.5
P04224 Gm5177-201ENSMUST00000183092 997 ntBASIC11.92□□□□□ -0.5
P04224 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC11.92□□□□□ -0.5
P04224 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.92□□□□□ -0.5
P04224 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04224 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P04224 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04224 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04224 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04224 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04224 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
P04224 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04224 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04224 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P04224 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
P04224 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
P04224 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04224 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.92□□□□□ -0.5
P04224 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P04224 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.92□□□□□ -0.5
P04224 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04224 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04224 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P04224 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04224 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04224 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.91□□□□□ -0.5
P04224 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
P04224 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04224 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04224 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04224 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04224 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04224 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04224 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04224 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
P04224 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04224 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
P04224 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P04224 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
P04224 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC11.91□□□□□ -0.5
P04224 Gm5479-201ENSMUST00000160578 435 ntBASIC11.91□□□□□ -0.5
P04224 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.91□□□□□ -0.5
P04224 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC11.91□□□□□ -0.5
P04224 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04224 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P04224 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms