Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.41□□□□□ -0.58
Hoxa3P02831 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxa3P02831 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Hoxa3P02831 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Hoxa3P02831 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.4□□□□□ -0.58
Hoxa3P02831 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Hoxa3P02831 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Acot6-202ENSMUST00000222921 3622 ntBASIC11.4□□□□□ -0.58
Hoxa3P02831 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Hoxa3P02831 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Hoxa3P02831 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Hoxa3P02831 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.4□□□□□ -0.58
Hoxa3P02831 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Gm27701-201ENSMUST00000184498 110 ntBASIC11.4□□□□□ -0.58
Hoxa3P02831 Gm28911-201ENSMUST00000188837 117 ntBASIC11.4□□□□□ -0.58
Hoxa3P02831 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.4□□□□□ -0.58
Hoxa3P02831 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.4□□□□□ -0.58
Hoxa3P02831 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.4□□□□□ -0.58
Hoxa3P02831 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.4□□□□□ -0.58
Hoxa3P02831 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.4□□□□□ -0.58
Hoxa3P02831 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Hoxa3P02831 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Hoxa3P02831 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxa3P02831 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Hoxa3P02831 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Hoxa3P02831 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Hoxa3P02831 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Hoxa3P02831 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.59
Hoxa3P02831 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Hoxa3P02831 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Hoxa3P02831 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Hoxa3P02831 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Hoxa3P02831 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.4□□□□□ -0.59
Hoxa3P02831 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Hoxa3P02831 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.39□□□□□ -0.59
Hoxa3P02831 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Hoxa3P02831 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.39□□□□□ -0.59
Hoxa3P02831 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.39□□□□□ -0.59
Hoxa3P02831 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Hoxa3P02831 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Hoxa3P02831 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.39□□□□□ -0.59
Hoxa3P02831 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Gm15376-201ENSMUST00000122258 783 ntBASIC11.39□□□□□ -0.59
Hoxa3P02831 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.39□□□□□ -0.59
Hoxa3P02831 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxa3P02831 Gm8602-201ENSMUST00000184045 607 ntBASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms