Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC16.37■□□□□ 0.21
Col4a1P02463 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Col4a1P02463 Gm12176-201ENSMUST00000121420 875 ntBASIC16.37■□□□□ 0.21
Col4a1P02463 Gm12715-201ENSMUST00000121430 1128 ntBASIC16.37■□□□□ 0.21
Col4a1P02463 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Col4a1P02463 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC16.37■□□□□ 0.21
Col4a1P02463 CT573034.1-201ENSMUST00000222983 313 ntBASIC16.37■□□□□ 0.21
Col4a1P02463 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col4a1P02463 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col4a1P02463 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Col4a1P02463 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC16.37■□□□□ 0.21
Col4a1P02463 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col4a1P02463 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Col4a1P02463 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Col4a1P02463 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col4a1P02463 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC16.37■□□□□ 0.21
Col4a1P02463 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col4a1P02463 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Col4a1P02463 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col4a1P02463 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.37■□□□□ 0.21
Col4a1P02463 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col4a1P02463 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Col4a1P02463 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col4a1P02463 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col4a1P02463 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col4a1P02463 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Col4a1P02463 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
Col4a1P02463 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Col4a1P02463 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col4a1P02463 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col4a1P02463 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Col4a1P02463 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col4a1P02463 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col4a1P02463 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col4a1P02463 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC16.37■□□□□ 0.21
Col4a1P02463 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col4a1P02463 Gm9445-201ENSMUST00000207454 1285 ntBASIC16.37■□□□□ 0.21
Col4a1P02463 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC16.37■□□□□ 0.21
Col4a1P02463 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col4a1P02463 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col4a1P02463 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col4a1P02463 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col4a1P02463 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col4a1P02463 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Col4a1P02463 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col4a1P02463 Gm44775-201ENSMUST00000207266 1456 ntBASIC16.36■□□□□ 0.21
Col4a1P02463 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col4a1P02463 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col4a1P02463 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col4a1P02463 Gm8862-201ENSMUST00000198379 1346 ntBASIC16.36■□□□□ 0.21
Col4a1P02463 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col4a1P02463 Gm37827-201ENSMUST00000194486 1542 ntBASIC16.36■□□□□ 0.21
Col4a1P02463 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC16.36■□□□□ 0.21
Col4a1P02463 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Col4a1P02463 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col4a1P02463 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Col4a1P02463 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col4a1P02463 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col4a1P02463 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col4a1P02463 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Col4a1P02463 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col4a1P02463 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col4a1P02463 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC16.36■□□□□ 0.21
Col4a1P02463 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col4a1P02463 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
Col4a1P02463 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col4a1P02463 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col4a1P02463 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC16.36■□□□□ 0.21
Col4a1P02463 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col4a1P02463 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col4a1P02463 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col4a1P02463 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a1P02463 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a1P02463 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a1P02463 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a1P02463 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Col4a1P02463 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Col4a1P02463 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a1P02463 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a1P02463 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a1P02463 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a1P02463 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Col4a1P02463 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a1P02463 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a1P02463 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a1P02463 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a1P02463 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a1P02463 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a1P02463 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a1P02463 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC16.35■□□□□ 0.21
Col4a1P02463 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.35■□□□□ 0.21
Col4a1P02463 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a1P02463 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a1P02463 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a1P02463 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Col4a1P02463 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col4a1P02463 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC16.34■□□□□ 0.21
Col4a1P02463 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a1P02463 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a1P02463 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms