Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H3f3cP02301 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H3f3cP02301 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
H3f3cP02301 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H3f3cP02301 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H3f3cP02301 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H3f3cP02301 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
H3f3cP02301 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
H3f3cP02301 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
H3f3cP02301 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H3f3cP02301 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
H3f3cP02301 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H3f3cP02301 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H3f3cP02301 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
H3f3cP02301 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
H3f3cP02301 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.68□□□□□ -0.54
H3f3cP02301 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
H3f3cP02301 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
H3f3cP02301 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.68□□□□□ -0.54
H3f3cP02301 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
H3f3cP02301 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.68□□□□□ -0.54
H3f3cP02301 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.68□□□□□ -0.54
H3f3cP02301 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.68□□□□□ -0.54
H3f3cP02301 Gm27437-201ENSMUST00000183429 107 ntBASIC11.68□□□□□ -0.54
H3f3cP02301 Mir6977-201ENSMUST00000184960 64 ntBASIC11.68□□□□□ -0.54
H3f3cP02301 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Gm18905-201ENSMUST00000205454 928 ntBASIC11.68□□□□□ -0.54
H3f3cP02301 Gm7730-201ENSMUST00000212486 454 ntBASIC11.68□□□□□ -0.54
H3f3cP02301 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.68□□□□□ -0.54
H3f3cP02301 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
H3f3cP02301 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.68□□□□□ -0.54
H3f3cP02301 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.68□□□□□ -0.54
H3f3cP02301 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
H3f3cP02301 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.68□□□□□ -0.54
H3f3cP02301 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H3f3cP02301 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H3f3cP02301 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
H3f3cP02301 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H3f3cP02301 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.67□□□□□ -0.54
H3f3cP02301 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H3f3cP02301 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.67□□□□□ -0.54
H3f3cP02301 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H3f3cP02301 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H3f3cP02301 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
H3f3cP02301 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H3f3cP02301 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
H3f3cP02301 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H3f3cP02301 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.67□□□□□ -0.54
H3f3cP02301 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
H3f3cP02301 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
H3f3cP02301 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.67□□□□□ -0.54
H3f3cP02301 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.67□□□□□ -0.54
H3f3cP02301 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
H3f3cP02301 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
H3f3cP02301 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
H3f3cP02301 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.67□□□□□ -0.54
H3f3cP02301 Gm16215-201ENSMUST00000161990 637 ntBASIC11.67□□□□□ -0.54
H3f3cP02301 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.67□□□□□ -0.54
H3f3cP02301 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.67□□□□□ -0.54
H3f3cP02301 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms