Protein–RNA interactions for Protein: P01739

T-cell receptor alpha chain V region 2B4, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01739 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
P01739 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P01739 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
P01739 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
P01739 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
P01739 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
P01739 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P01739 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P01739 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
P01739 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
P01739 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
P01739 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
P01739 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
P01739 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
P01739 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
P01739 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
P01739 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.27□□□□□ -0.76
P01739 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
P01739 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
P01739 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
P01739 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC10.27□□□□□ -0.77
P01739 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
P01739 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 Gm11557-201ENSMUST00000120200 1008 ntBASIC10.27□□□□□ -0.77
P01739 Gm22175-201ENSMUST00000175007 78 ntBASIC10.27□□□□□ -0.77
P01739 Gm8927-201ENSMUST00000181978 981 ntBASIC10.27□□□□□ -0.77
P01739 Gm4804-201ENSMUST00000182234 999 ntBASIC10.27□□□□□ -0.77
P01739 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC10.27□□□□□ -0.77
P01739 AC124732.2-201ENSMUST00000221977 316 ntBASIC10.27□□□□□ -0.77
P01739 Gm3222-201ENSMUST00000071282 990 ntBASIC10.27□□□□□ -0.77
P01739 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
P01739 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 Gm5320-201ENSMUST00000207163 1519 ntBASIC10.27□□□□□ -0.77
P01739 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
P01739 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01739 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P01739 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P01739 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P01739 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P01739 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
P01739 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.26□□□□□ -0.77
P01739 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P01739 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
P01739 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P01739 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
P01739 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
P01739 Gm6198-201ENSMUST00000191337 2929 ntBASIC10.26□□□□□ -0.77
P01739 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P01739 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC10.26□□□□□ -0.77
P01739 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
P01739 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
P01739 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
P01739 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC10.26□□□□□ -0.77
P01739 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
P01739 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC10.26□□□□□ -0.77
P01739 Gm7820-201ENSMUST00000121012 1052 ntBASIC10.26□□□□□ -0.77
P01739 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
P01739 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC10.26□□□□□ -0.77
P01739 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC10.26□□□□□ -0.77
P01739 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC10.26□□□□□ -0.77
P01739 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
P01739 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
P01739 Gm37277-201ENSMUST00000194052 1111 ntBASIC10.26□□□□□ -0.77
P01739 Gm44344-201ENSMUST00000200287 129 ntBASIC10.26□□□□□ -0.77
P01739 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P01739 Rbfox2-208ENSMUST00000227930 1218 ntBASIC10.26□□□□□ -0.77
P01739 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P01739 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P01739 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
P01739 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P01739 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P01739 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms