Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Gm2231-201ENSMUST00000125661 612 ntBASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Gm25732-201ENSMUST00000175168 60 ntBASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Gm38144-201ENSMUST00000192790 465 ntBASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Gm30285-201ENSMUST00000214614 422 ntBASIC12.58□□□□□ -0.4
Tnfrsf17O88472 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf17O88472 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Gm14130-201ENSMUST00000118417 987 ntBASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Gm9083-201ENSMUST00000120423 819 ntBASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Gm27023-201ENSMUST00000182372 285 ntBASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Gm27438-201ENSMUST00000183480 110 ntBASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Gm7467-201ENSMUST00000185173 652 ntBASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Gm44967-201ENSMUST00000207047 631 ntBASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.57□□□□□ -0.4
Tnfrsf17O88472 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf17O88472 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.56□□□□□ -0.4
Tnfrsf17O88472 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.56□□□□□ -0.4
Tnfrsf17O88472 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 152.3 ms